Protein–RNA interactions for Protein: O00337

SLC28A1, Sodium/nucleoside cotransporter 1, humanhuman

Predictions only

Length 649 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1O00337 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
SLC28A1O00337 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.34□□□□□ -1.88
SLC28A1O00337 AL356473.1-201ENST00000406203 1408 ntBASIC3.34□□□□□ -1.88
SLC28A1O00337 OR4G11P-202ENST00000642116 1414 ntBASIC3.34□□□□□ -1.88
SLC28A1O00337 AC032011.1-201ENST00000611703 1549 ntBASIC3.34□□□□□ -1.88
SLC28A1O00337 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC28A1O00337 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SLC28A1O00337 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC28A1O00337 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC28A1O00337 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SLC28A1O00337 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC28A1O00337 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC28A1O00337 RNU4-92P-201ENST00000363783 136 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 HMGB1P17-201ENST00000403495 628 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC28A1O00337 DBIP2-201ENST00000419076 262 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 EZH2P1-201ENST00000431167 291 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC28A1O00337 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC28A1O00337 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC28A1O00337 HSPE1P28-201ENST00000443139 211 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AC008264.1-201ENST00000447612 367 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC28A1O00337 RPL26P28-201ENST00000451325 435 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AC097262.1-201ENST00000452559 548 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.33□□□□□ -1.88
SLC28A1O00337 RPL23AP31-201ENST00000456160 467 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC28A1O00337 AC023424.2-201ENST00000493479 777 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC28A1O00337 AC109445.1-201ENST00000512356 383 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 RN7SKP13-201ENST00000515933 244 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 RNY4P37-201ENST00000516225 96 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 SNORA70.18-201ENST00000516696 98 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 MIR2276-201ENST00000516886 89 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AC093331.1-201ENST00000521474 169 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC28A1O00337 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC28A1O00337 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC28A1O00337 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC28A1O00337 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC28A1O00337 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.33□□□□□ -1.88
SLC28A1O00337 FAM60BP-201ENST00000578364 658 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AC006254.3-201ENST00000603353 884 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AC004987.4-201ENST00000603383 338 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 DUXAP3-201ENST00000603616 594 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AC067959.1-201ENST00000604334 379 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AP001330.4-201ENST00000604350 154 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 MIR7851-201ENST00000610611 160 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AL355810.1-201ENST00000614629 552 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SLC28A1O00337 AC095031.1-201ENST00000623685 672 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 MTND4P34-201ENST00000572715 1371 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 AL390862.1-201ENST00000635467 1469 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SLC28A1O00337 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SLC28A1O00337 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.33□□□□□ -1.88
SLC28A1O00337 AL645937.1-201ENST00000641739 1652 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
SLC28A1O00337 AL079343.1-201ENST00000572358 1771 ntBASIC3.33□□□□□ -1.88
SLC28A1O00337 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
SLC28A1O00337 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC28A1O00337 AC007496.3-201ENST00000624987 3443 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC28A1O00337 RNU6-1155P-201ENST00000363554 107 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 Y_RNA.192-201ENST00000363977 102 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 RNU6-621P-201ENST00000364752 109 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 Y_RNA.311-201ENST00000365068 96 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
SLC28A1O00337 RNU6-636P-201ENST00000384598 107 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 RNU6-906P-201ENST00000384700 70 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 PTMAP5-201ENST00000393073 333 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 TAF9BP1-201ENST00000396646 746 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC28A1O00337 SKINT1L-201ENST00000401057 817 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 AC126124.2-201ENST00000413542 321 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 AC093578.1-201ENST00000415219 368 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 AC007742.1-201ENST00000425789 329 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 ATP5F1P1-201ENST00000433775 569 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 ELOCP26-201ENST00000436067 329 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 NUTF2P7-201ENST00000453086 375 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 RPL21P134-201ENST00000453468 483 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC28A1O00337 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC28A1O00337 NAA50-206ENST00000493454 964 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC28A1O00337 WBP1LP4-201ENST00000505043 344 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC28A1O00337 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.32□□□□□ -1.88
SLC28A1O00337 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC28A1O00337 TPT1P8-201ENST00000510120 555 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 AC079395.1-201ENST00000510981 262 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 RN7SKP18-201ENST00000516005 275 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC28A1O00337 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.32□□□□□ -1.88
SLC28A1O00337 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
SLC28A1O00337 AL845331.3-202ENST00000562856 261 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.32□□□□□ -1.88
SLC28A1O00337 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.32□□□□□ -1.88
SLC28A1O00337 MTND1P8-201ENST00000571424 950 ntBASIC3.32□□□□□ -1.88
SLC28A1O00337 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 96.6 ms