Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 RNU6-1261P-201ENST00000517194 104 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM1O00151 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM1O00151 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDLIM1O00151 AC239860.2-201ENST00000525886 270 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM1O00151 MED28P5-201ENST00000528254 438 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AP003385.6-201ENST00000531603 374 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM1O00151 AC089983.1-201ENST00000549807 701 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM1O00151 AC008127.2-201ENST00000549925 1075 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 SYF2P1-201ENST00000550658 413 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM1O00151 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.3□□□□□ -1.88
PDLIM1O00151 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM1O00151 MMP2-AS1-202ENST00000569037 553 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM1O00151 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.3□□□□□ -1.88
PDLIM1O00151 RN7SL339P-201ENST00000580597 296 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AC015688.2-201ENST00000584523 262 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 BNIP3P40-201ENST00000596017 556 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.3□□□□□ -1.88
PDLIM1O00151 AL355812.1-201ENST00000603215 216 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 DPRXP5-201ENST00000604662 539 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PDLIM1O00151 AC008083.4-201ENST00000615076 444 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM1O00151 MKKS-204ENST00000639674 192 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PDLIM1O00151 MUC15-205ENST00000529533 2084 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDLIM1O00151 FAM35BP-202ENST00000497389 3337 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDLIM1O00151 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDLIM1O00151 AC116096.1-201ENST00000566804 2314 ntBASIC3.3□□□□□ -1.88
PDLIM1O00151 CHD9-203ENST00000447540 11509 ntTSL 5 BASIC3.3□□□□□ -1.88
PDLIM1O00151 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM1O00151 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM1O00151 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.29□□□□□ -1.88
PDLIM1O00151 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM1O00151 AC107982.1-201ENST00000507171 1300 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
PDLIM1O00151 RNA5SP124-201ENST00000362739 110 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 MIR554-201ENST00000384874 96 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM1O00151 AL136310.1-201ENST00000404926 654 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 MTCO2P8-201ENST00000412213 658 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 MTATP6P20-201ENST00000414147 562 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 RPS3AP37-201ENST00000419176 745 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 HSFY1P1-201ENST00000423928 1178 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 AC018644.1-201ENST00000429934 551 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.29□□□□□ -1.88
PDLIM1O00151 AL133547.1-201ENST00000448546 220 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM1O00151 AC092757.1-201ENST00000467293 467 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 MTCO3P35-201ENST00000485582 781 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.29□□□□□ -1.88
PDLIM1O00151 AC010460.2-201ENST00000509054 677 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 RNU1-45P-201ENST00000517191 141 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.29□□□□□ -1.88
PDLIM1O00151 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM1O00151 AL669831.4-202ENST00000590817 238 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.29□□□□□ -1.88
PDLIM1O00151 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.29□□□□□ -1.88
PDLIM1O00151 AP001521.1-201ENST00000609150 300 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC3.29□□□□□ -1.88
PDLIM1O00151 AL590282.1-201ENST00000610379 1136 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 AC231759.1-201ENST00000616455 597 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 AC073968.1-201ENST00000618594 637 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 AL121895.2-201ENST00000619558 447 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 AC022509.4-201ENST00000621404 572 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 GMFB-210ENST00000628554 639 ntTSL 4 BASIC3.29□□□□□ -1.88
PDLIM1O00151 AC012442.3-202ENST00000636742 206 ntBASIC3.29□□□□□ -1.88
PDLIM1O00151 PPP2R2A-224ENST00000640787 318 ntTSL 5 BASIC3.29□□□□□ -1.88
PDLIM1O00151 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM1O00151 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM1O00151 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM1O00151 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDLIM1O00151 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.28□□□□□ -1.88
PDLIM1O00151 TCF12-203ENST00000343827 3956 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM1O00151 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM1O00151 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM1O00151 AL353743.1-202ENST00000431724 1695 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 ZNF29P-201ENST00000225587 168 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PDLIM1O00151 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM1O00151 NACA3P-201ENST00000359690 648 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 RNU6-50P-201ENST00000362356 103 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 RNU5D-1-201ENST00000363299 116 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDLIM1O00151 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
PDLIM1O00151 RNU6-413P-201ENST00000384115 107 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 RNU6-761P-201ENST00000384148 107 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 RNU6-339P-201ENST00000384310 107 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 AC016769.3-201ENST00000396562 315 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 AL024474.1-201ENST00000404655 591 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 RNA5SP129-201ENST00000410276 118 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 RNA5SP56-201ENST00000410277 118 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 RNU6-584P-201ENST00000410350 95 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC3.28□□□□□ -1.88
PDLIM1O00151 RAB9AP3-201ENST00000412737 573 ntBASIC3.28□□□□□ -1.88
PDLIM1O00151 LUZP4P1-201ENST00000415420 344 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms