Protein–RNA interactions for Protein: A0A0B4J275

TRAV17, T-cell receptor alpha variable 17 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV17A0A0B4J275 RPL21P16-201ENST00000495531 483 ntBASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 RPS29P21-201ENST00000496272 170 ntBASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 AC123904.3-201ENST00000547218 814 ntBASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 MIR4648-201ENST00000580107 72 ntBASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 AL161912.3-201ENST00000605404 628 ntBASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 BX664608.1-201ENST00000610519 487 ntBASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 TUG1_1.1-201ENST00000610654 145 ntBASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TRAV17A0A0B4J275 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC016717.2-201ENST00000609089 5141 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC080100.1-201ENST00000624239 5356 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AP006437.1-201ENST00000641440 3685 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 RNU1-91P-201ENST00000364746 163 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 RNU6-356P-201ENST00000384140 107 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 SNORA41-201ENST00000384675 132 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 RN7SKP223-201ENST00000410582 62 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 FAM103A2P-201ENST00000444122 354 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 SSXP4-201ENST00000451349 245 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 GSTA11P-201ENST00000452866 669 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 VN1R17P-201ENST00000472048 1090 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 RPL36AP51-201ENST00000487216 318 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC090071.1-201ENST00000507713 644 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 KLHL2P1-201ENST00000508691 521 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 IGKV3-31-201ENST00000523109 329 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AP000873.5-201ENST00000533906 236 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 MIR1273D-201ENST00000577266 86 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC245128.3-201ENST00000594721 748 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC004696.1-201ENST00000614345 607 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 RMST_5.1-201ENST00000618704 126 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 RPL23AP61-201ENST00000623642 466 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 MIR6733-201ENST00000635723 61 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 CRYM-AS1-204ENST00000637983 556 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 ZCCHC10-202ENST00000355372 2160 ntAPPRIS ALT2 TSL 2 BASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC004925.1-201ENST00000624256 2706 ntBASIC2.19□□□□□ -2.06
TRAV17A0A0B4J275 AC006020.1-201ENST00000420179 1854 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 SNORD114-30-201ENST00000364448 72 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 MIR504-201ENST00000385065 83 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 MIR181B1-201ENST00000385240 110 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 RPL19P1-201ENST00000411635 428 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 AC241520.1-201ENST00000422654 1099 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 HMGB3P12-201ENST00000438745 556 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 AC026436.1-201ENST00000510537 270 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 AC034244.2-201ENST00000514668 858 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 RNA5SP281-201ENST00000516504 135 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 OR5AK3P-201ENST00000527486 1297 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 AC025281.1-201ENST00000567026 265 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 AL391834.1-201ENST00000609609 560 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 AC046143.2-201ENST00000609789 160 ntBASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
TRAV17A0A0B4J275 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 OR8H1-201ENST00000313022 1038 ntAPPRIS P2 BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 SNORA7.2-201ENST00000364446 145 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 MTND4P13-201ENST00000402078 1023 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AL162578.1-201ENST00000406202 378 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AC107081.1-201ENST00000414975 361 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 EI24P1-201ENST00000416584 867 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AL162400.2-201ENST00000427547 157 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 WASF1P1-201ENST00000447560 1131 ntBASIC2.17□□□□□ -2.06
TRAV17A0A0B4J275 RPL23AP20-201ENST00000447965 421 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms