Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 RNU1-5P-201ENST00000362684 144 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 RNU4-84P-201ENST00000364200 139 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 RNU6-1056P-201ENST00000383996 107 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 RNU6-21P-201ENST00000384710 107 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 SNORA7A-201ENST00000384765 139 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AC116036.1-201ENST00000412199 367 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 TBCAP1-201ENST00000436520 327 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AC245291.3-201ENST00000443400 292 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 MACROD2-IT1-201ENST00000448536 665 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 PPIAP27-201ENST00000453800 265 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AL133244.1-201ENST00000456007 258 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AC034236.1-201ENST00000469891 373 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 RN7SL379P-201ENST00000479912 293 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 RPS27P20-201ENST00000492051 246 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 NDUFB5P1-201ENST00000508134 564 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 IGLC4-201ENST00000517690 248 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AC090617.3-201ENST00000573670 475 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 MIR548X2-201ENST00000579776 100 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 RPL7AP69-201ENST00000595306 806 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 MIR6778-201ENST00000617912 73 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 MIR6806-201ENST00000622141 64 ntBASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 ARFGAP2-230ENST00000629231 213 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 SEMG1-201ENST00000372781 1662 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 CATSPER2-202ENST00000381761 1758 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 PCLO-203ENST00000423517 17147 ntTSL 5 BASIC6.64□□□□□ -1.35
PCDHGA4Q9Y5G9 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 MPHOSPH9-220ENST00000606320 6351 ntAPPRIS P2 TSL 5 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 ZSCAN12-202ENST00000396827 3909 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 ESRRG-201ENST00000359162 5197 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 CRYBA1-201ENST00000225387 783 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 MED1-201ENST00000300651 5844 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AC010894.1-201ENST00000313760 361 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AC007685.1-201ENST00000329806 452 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 RNA5SP512-201ENST00000364550 120 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 SNORA64.3-201ENST00000365647 134 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 Y_RNA.571-201ENST00000384753 98 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AL357139.1-201ENST00000407792 426 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 RNU5A-5P-201ENST00000411054 116 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AC000089.1-201ENST00000424559 801 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 PTGES3P4-201ENST00000426243 356 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 CFL1P1-202ENST00000432948 411 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 TIMM8BP2-201ENST00000445940 251 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 RN7SL170P-201ENST00000487098 295 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AC093878.1-201ENST00000515630 432 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AC103783.1-201ENST00000520506 373 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AC021713.1-201ENST00000526554 510 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AC022075.2-201ENST00000535911 562 ntTSL 4 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 MIR5692C2-201ENST00000577959 77 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AC087575.1-201ENST00000585087 229 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 MAGT1-204ENST00000610432 4019 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AC034229.6-201ENST00000623704 224 ntBASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 OR2T2-203ENST00000642130 3331 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 AC016576.1-201ENST00000637153 3585 ntTSL 5 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 ATAD1-202ENST00000328142 2939 ntAPPRIS P1 TSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 LRRC37B-220ENST00000584368 2773 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.63□□□□□ -1.35
PCDHGA4Q9Y5G9 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 SFTPD-AS1-201ENST00000608229 5001 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 ANKFN1-201ENST00000318698 2426 ntAPPRIS P2 TSL 2 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 XPO1-202ENST00000404992 4105 ntAPPRIS P1 TSL 2 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 BRWD3-201ENST00000373275 11381 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 FLG-201ENST00000368799 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 LRRC37B-201ENST00000327564 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 TSHZ2-202ENST00000371497 12187 ntAPPRIS P1 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 FANCD2P2-201ENST00000437591 1400 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 HNF4G-203ENST00000396423 4209 ntAPPRIS P3 TSL 1 (best) BASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 RNA5SP267-201ENST00000364893 126 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 RN7SKP189-201ENST00000365042 330 ntBASIC6.62□□□□□ -1.35
PCDHGA4Q9Y5G9 SNORA46.1-201ENST00000391069 153 ntBASIC6.62□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms