Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA6Q9Y5G7 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
PCDHGA6Q9Y5G7 FAM197Y9-201ENST00000451062 2332 ntTSL 5 BASIC4.57□□□□□ -1.68
PCDHGA6Q9Y5G7 AC012020.1-201ENST00000624541 1728 ntBASIC4.57□□□□□ -1.68
PCDHGA6Q9Y5G7 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.57□□□□□ -1.68
PCDHGA6Q9Y5G7 PSMD1-213ENST00000619128 3161 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
PCDHGA6Q9Y5G7 CDH17-201ENST00000027335 3693 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA6Q9Y5G7 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
PCDHGA6Q9Y5G7 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 EYA1-205ENST00000388742 3907 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 Y_RNA.9-201ENST00000362354 101 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 SNORA73.1-201ENST00000363107 205 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 RNU6-1155P-201ENST00000363554 107 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 RNY4P16-201ENST00000364768 94 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 U3.30-201ENST00000391308 210 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AC002486.1-201ENST00000435098 391 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 FTH1P1-201ENST00000437933 532 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 TPT1P14-201ENST00000448018 505 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 RPS23P7-201ENST00000466210 444 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 NIP7P2-201ENST00000485801 544 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AC011352.1-201ENST00000512300 793 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 RNU6-798P-201ENST00000516912 103 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 RPL26P30-202ENST00000602923 645 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 FAM27B-201ENST00000610601 213 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AC083809.1-201ENST00000615051 472 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AL359880.1-201ENST00000621879 266 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AL049536.1-201ENST00000625043 744 ntBASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 ZNF705A-204ENST00000610508 3378 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PCDHGA6Q9Y5G7 AC009643.2-201ENST00000603543 1448 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 RGS5-212ENST00000618415 5812 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 CMYA5-201ENST00000446378 12847 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC126755.2-208ENST00000327792 462 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC138969.1-213ENST00000331436 462 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 RNU6-1097P-201ENST00000363586 107 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 Y_RNA.481-201ENST00000384373 102 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 RNU4-65P-201ENST00000410473 140 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 TTTY12-201ENST00000413466 979 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 TBCAP2-201ENST00000416175 326 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC244098.2-201ENST00000422068 99 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 MTCO2P3-201ENST00000442543 421 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC000111.2-201ENST00000448200 210 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC022364.2-201ENST00000457963 554 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 RPL12P20-201ENST00000475538 479 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 UBE2Q2P9-201ENST00000490086 202 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC079382.1-201ENST00000493346 557 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 Y_RNA.719-201ENST00000517156 106 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 OR4T1P-201ENST00000554933 911 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC136624.4-201ENST00000573044 370 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AC022726.1-201ENST00000587475 207 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 TEX41-238ENST00000604253 709 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 FRG1KP-201ENST00000623592 341 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 NOL8P1-201ENST00000508336 3529 ntBASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PCDHGA6Q9Y5G7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms