Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AC073264.1-201ENST00000411508 416 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 RPS3AP25-201ENST00000411660 793 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AC233728.2-201ENST00000425348 757 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.11□□□□□ -2.07
AP4S1Q9Y587 RPL23AP33-201ENST00000442301 452 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AL157827.1-201ENST00000447622 132 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AC011753.1-201ENST00000451001 220 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 SNORD109B-201ENST00000458961 67 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 SNORD109A-201ENST00000459128 67 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AC110792.2-201ENST00000510278 224 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AC090616.5-202ENST00000582111 297 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 MIR5007-201ENST00000583098 95 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AC008739.3-201ENST00000603262 127 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AL161756.2-201ENST00000604597 246 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 APOOP1-201ENST00000604695 592 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AL133507.1-201ENST00000605269 557 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AC019131.2-201ENST00000609071 870 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AL161734.1-201ENST00000609720 557 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 VN1R74P-201ENST00000613259 503 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
AP4S1Q9Y587 AC020763.5-201ENST00000623298 430 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 OR8B1P-202ENST00000641132 1178 ntBASIC2.11□□□□□ -2.07
AP4S1Q9Y587 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.11□□□□□ -2.07
AP4S1Q9Y587 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 RNU1-85P-201ENST00000364127 164 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 HMGN2P30-201ENST00000423237 256 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AC093716.1-201ENST00000435923 377 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 ELOCP11-201ENST00000436690 332 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 PGBD4P3-201ENST00000440731 581 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 ELOCP16-201ENST00000444494 332 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 RPL6P5-201ENST00000445678 828 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 NANOGNBP1-201ENST00000448444 480 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AC025033.1-201ENST00000463883 194 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 RNU6-1073P-201ENST00000517182 106 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AC021269.2-201ENST00000532318 330 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 NBEAP1-201ENST00000554452 979 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 DNAJC8P1-201ENST00000554535 372 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AC002984.1-201ENST00000591692 448 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 VN1R78P-201ENST00000597393 564 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AL020997.2-201ENST00000602607 184 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AC103810.6-201ENST00000606708 136 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AC107294.1-201ENST00000609524 467 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 BX323046.1-201ENST00000610145 535 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AC084757.4-201ENST00000616350 526 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AC002064.3-201ENST00000623448 346 ntBASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
AP4S1Q9Y587 AC138915.1-201ENST00000565427 1685 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.09□□□□□ -2.07
AP4S1Q9Y587 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
AP4S1Q9Y587 RNA5SP338-201ENST00000410495 85 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 RNU2-40P-201ENST00000410833 196 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 HMGB1P11-201ENST00000413899 637 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 AC092447.6-201ENST00000414578 210 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 Z75741.2-201ENST00000417272 1167 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC2.09□□□□□ -2.07
AP4S1Q9Y587 MTATP6P4-201ENST00000427725 675 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 ARL5AP4-201ENST00000430731 512 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 PTP4A1P3-201ENST00000433661 420 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 AC018634.1-201ENST00000437554 401 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 SDR42E1P3-201ENST00000438345 502 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC2.09□□□□□ -2.07
AP4S1Q9Y587 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.09□□□□□ -2.07
AP4S1Q9Y587 RPL23AP7-203ENST00000449021 469 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC2.09□□□□□ -2.07
AP4S1Q9Y587 AL021397.1-201ENST00000451806 248 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC2.09□□□□□ -2.07
AP4S1Q9Y587 AC090515.1-201ENST00000465295 476 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC2.09□□□□□ -2.07
AP4S1Q9Y587 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.09□□□□□ -2.07
AP4S1Q9Y587 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
AP4S1Q9Y587 CDC42P4-201ENST00000510507 563 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 RNA5SP364-201ENST00000516938 78 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 MTCO1P47-201ENST00000523889 1271 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 CENPUP2-201ENST00000555897 1186 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.09□□□□□ -2.07
AP4S1Q9Y587 MIR4325-201ENST00000583049 90 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 MIR5002-201ENST00000584713 97 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 AC069304.3-201ENST00000603938 1084 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.09□□□□□ -2.07
AP4S1Q9Y587 VIS1.1-201ENST00000610517 203 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 OFD1P5Y-201ENST00000447585 2590 ntBASIC2.09□□□□□ -2.07
AP4S1Q9Y587 AC008432.1-201ENST00000615912 1320 ntBASIC2.09□□□□□ -2.08
AP4S1Q9Y587 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.08
AP4S1Q9Y587 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.09□□□□□ -2.08
AP4S1Q9Y587 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.08□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms