Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
NINLQ9Y2I6 RNU6-98P-201ENST00000384173 107 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 MIR591-201ENST00000385290 95 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 AL589655.1-201ENST00000405398 482 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 AL592148.1-201ENST00000413568 445 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 MTCO3P4-201ENST00000419236 787 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 RFESDP1-201ENST00000422350 461 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 MTND2P21-201ENST00000436242 1042 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 AL138799.3-201ENST00000438968 350 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC3.79□□□□□ -1.8
NINLQ9Y2I6 AC006445.2-201ENST00000510061 472 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 RN7SKP234-201ENST00000517173 224 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC3.79□□□□□ -1.8
NINLQ9Y2I6 HPRT1P3-201ENST00000539521 576 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.79□□□□□ -1.8
NINLQ9Y2I6 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC3.79□□□□□ -1.8
NINLQ9Y2I6 AC012414.2-201ENST00000559474 187 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 RNA5SP108-201ENST00000605921 117 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 AC113194.1-201ENST00000606037 500 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 MIR6864-201ENST00000617935 70 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
NINLQ9Y2I6 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.79□□□□□ -1.8
NINLQ9Y2I6 AC099063.3-201ENST00000642066 185 ntBASIC3.79□□□□□ -1.8
NINLQ9Y2I6 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
NINLQ9Y2I6 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.79□□□□□ -1.8
NINLQ9Y2I6 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
NINLQ9Y2I6 RNU1-112P-201ENST00000364401 164 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 RNU2-6P-201ENST00000411404 190 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 FO393419.3-201ENST00000428741 282 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 RPL7P29-201ENST00000437151 728 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 AL662791.1-201ENST00000441992 928 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.78□□□□□ -1.8
NINLQ9Y2I6 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.78□□□□□ -1.8
NINLQ9Y2I6 ARL5AP2-201ENST00000444698 533 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.78□□□□□ -1.8
NINLQ9Y2I6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.78□□□□□ -1.8
NINLQ9Y2I6 AC025181.1-201ENST00000477507 416 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 AC090525.1-201ENST00000479116 478 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 MTCO1P31-201ENST00000506355 492 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 AC008565.1-201ENST00000509046 885 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC3.78□□□□□ -1.8
NINLQ9Y2I6 AC092593.1-201ENST00000515413 1815 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.78□□□□□ -1.8
NINLQ9Y2I6 AC007536.1-201ENST00000533382 349 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 AC005951.1-201ENST00000576706 485 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 CBX3P2-202ENST00000583365 535 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.78□□□□□ -1.8
NINLQ9Y2I6 LRRC77P-213ENST00000637727 880 ntBASIC3.78□□□□□ -1.8
NINLQ9Y2I6 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
NINLQ9Y2I6 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.78□□□□□ -1.8
NINLQ9Y2I6 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
NINLQ9Y2I6 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC3.78□□□□□ -1.8
NINLQ9Y2I6 AL355578.1-201ENST00000607405 1328 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NINLQ9Y2I6 MIR592-201ENST00000384959 97 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 HMGB1P13-201ENST00000406019 642 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 MIR1289-2-201ENST00000408360 111 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 RNU2-37P-201ENST00000410695 177 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 RNA5SP344-201ENST00000411081 104 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 DPPA2P1-201ENST00000428060 556 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 RPS29P6-201ENST00000438196 145 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.77□□□□□ -1.81
NINLQ9Y2I6 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.77□□□□□ -1.81
NINLQ9Y2I6 RPL21P41-201ENST00000459863 264 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 AC089999.1-201ENST00000460336 374 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.77□□□□□ -1.81
NINLQ9Y2I6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.77□□□□□ -1.81
NINLQ9Y2I6 RNA5SP445-201ENST00000515889 115 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 AC018861.2-201ENST00000518078 513 ntTSL 2 BASIC3.77□□□□□ -1.81
NINLQ9Y2I6 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.77□□□□□ -1.81
NINLQ9Y2I6 MIR3605-201ENST00000583214 100 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 CR589904.2-201ENST00000612533 440 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 AC006065.5-201ENST00000623427 349 ntBASIC3.77□□□□□ -1.81
NINLQ9Y2I6 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
NINLQ9Y2I6 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NINLQ9Y2I6 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
NINLQ9Y2I6 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
NINLQ9Y2I6 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 METTL21EP-201ENST00000298105 713 ntBASIC3.76□□□□□ -1.81
NINLQ9Y2I6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 HMGB3P30-201ENST00000457863 606 ntBASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AC005351.1-201ENST00000511152 786 ntBASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AC090751.1-201ENST00000566966 267 ntBASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AC083760.1-201ENST00000589621 670 ntBASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AC008277.2-201ENST00000605196 797 ntBASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AC069234.5-201ENST00000611056 416 ntBASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 AC048347.1-201ENST00000624621 427 ntBASIC3.76□□□□□ -1.81
NINLQ9Y2I6 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.76□□□□□ -1.81
NINLQ9Y2I6 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms