Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AC008013.2-202ENST00000637965 364 ntBASIC6.57□□□□□ -1.36
ZC3H4Q9UPT8 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
ZC3H4Q9UPT8 SCN2A-209ENST00000636071 8881 ntAPPRIS ALT1 TSL 5 BASIC6.57□□□□□ -1.36
ZC3H4Q9UPT8 SCN2A-214ENST00000636985 8856 ntTSL 5 BASIC6.57□□□□□ -1.36
ZC3H4Q9UPT8 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ZC3H4Q9UPT8 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZC3H4Q9UPT8 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ZC3H4Q9UPT8 AC010266.2-201ENST00000564741 3255 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AC138907.8-201ENST00000623981 2256 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 OFD1P9Y-201ENST00000417699 1491 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 Y_RNA.212-201ENST00000364177 102 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 RNA5SP505-201ENST00000364748 108 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 RNU6-1226P-201ENST00000384317 107 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 SNORA16A-201ENST00000384342 137 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 EIF4E2P1-201ENST00000393781 255 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AL136372.1-201ENST00000403060 228 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 RNU2-47P-201ENST00000410649 186 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 RN7SKP27-201ENST00000410684 333 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 RNF10P1-201ENST00000418589 369 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AC068287.1-201ENST00000430283 295 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 RPL23AP89-201ENST00000439324 255 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AL596266.1-201ENST00000448132 400 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 RPL5P30-201ENST00000465511 891 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 RN7SL354P-201ENST00000469282 294 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AC128713.1-201ENST00000471495 306 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AL139099.1-201ENST00000497398 403 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 RNU6-798P-201ENST00000516912 103 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AC021006.3-201ENST00000530771 192 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 NF1P5-201ENST00000588287 448 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AC023043.2-201ENST00000589678 1026 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AC006115.2-201ENST00000596823 202 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AL008729.2-201ENST00000606393 473 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AC100812.1-201ENST00000607622 580 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 AC004696.1-201ENST00000614345 607 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 MIR6758-201ENST00000620653 63 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 CACNA1E-204ENST00000367567 14757 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 MFF-206ENST00000392059 1710 ntTSL 5 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 RBMX-203ENST00000431446 2004 ntTSL 2 BASIC6.56□□□□□ -1.36
ZC3H4Q9UPT8 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 RN7SKP95-201ENST00000362860 303 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 RNU6-99P-201ENST00000364721 107 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 SNORD82-201ENST00000365530 70 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 C9orf153-202ENST00000376001 409 ntAPPRIS ALT2 TSL 3 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 RNU2-3P-201ENST00000410144 191 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 RPS20P1-201ENST00000434853 354 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 AC107222.1-201ENST00000510899 637 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 RNU6-388P-201ENST00000517012 105 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 RNU6-389P-201ENST00000517048 105 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 AC009812.2-201ENST00000517657 457 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 AC136777.2-201ENST00000522979 358 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 AL031320.1-201ENST00000604177 357 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 AL627230.1-201ENST00000613077 211 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 AL355365.1-201ENST00000616480 294 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 AC010378.1-201ENST00000619270 362 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 PLCE1P1-201ENST00000622094 305 ntBASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 APOL6-201ENST00000409652 10121 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 LAMA2-201ENST00000421865 9640 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 NBPF19-201ENST00000369227 3670 ntTSL 5 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 NBPF20-203ENST00000594479 3670 ntTSL 5 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 NBPF14-210ENST00000621066 3670 ntTSL 5 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ZC3H4Q9UPT8 TBC1D5-201ENST00000253692 7854 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 141.8 ms