Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 MTND5P33-201ENST00000571250 1450 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 MIR568-201ENST00000385036 95 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 MIR559-201ENST00000385188 96 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 MIR921-201ENST00000401133 56 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 RNU6-77P-201ENST00000410554 91 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 RN7SKP167-201ENST00000411047 285 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 RPL7P44-201ENST00000424827 742 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 RPL21P91-201ENST00000429231 479 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 AL450263.2-201ENST00000439400 589 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 AC020719.1-201ENST00000448977 518 ntTSL 3 BASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 AL121877.1-201ENST00000453704 622 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 RN7SL283P-201ENST00000489055 303 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 OR5BN1P-201ENST00000532955 829 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 GTF2IP8-201ENST00000560687 584 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 AL355375.2-201ENST00000574825 175 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 VN1R79P-201ENST00000593540 513 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 AC093788.1-201ENST00000609356 927 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 LINC01378-205ENST00000615833 158 ntTSL 5 BASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 AC097461.1-201ENST00000568928 2821 ntBASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC6.34□□□□□ -1.4
COL17A1Q9UMD9 CFHR4-204ENST00000608469 1601 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 GTF2H2B-203ENST00000508065 1432 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 ZNF37BP-203ENST00000452306 1352 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 RNU6-185P-201ENST00000384421 107 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 RN7SKP56-201ENST00000410513 331 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 RPS25P9-201ENST00000435591 252 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 RPL7P29-201ENST00000437151 728 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 RPL7P24-201ENST00000493052 752 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 RNA5SP446-201ENST00000515955 82 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 RN7SKP40-201ENST00000517211 242 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 MTND1P35-201ENST00000526739 508 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 OR4C2P-201ENST00000530855 1064 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 ELOCP31-201ENST00000540463 467 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 PCMTD1P2-201ENST00000565017 355 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 AC010201.1-201ENST00000605051 540 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 U3.45-201ENST00000607547 219 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 AC087588.2-201ENST00000617667 426 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 AC091905.1-201ENST00000624400 311 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 AC116563.2-201ENST00000624751 535 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 MIR6863-201ENST00000636112 90 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 AC119674.1-212ENST00000641155 993 ntBASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 NUDT12-201ENST00000230792 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC6.33□□□□□ -1.4
COL17A1Q9UMD9 AC074029.4-201ENST00000624796 1859 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 SNORA51.2-201ENST00000364595 132 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 Y_RNA.500-201ENST00000384466 111 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 MIR128-1-201ENST00000384921 82 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 MT-TP-201ENST00000387461 68 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 RNU6-244P-201ENST00000391028 104 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 EI24P3-201ENST00000399046 1062 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 HSPE1P12-201ENST00000412576 301 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 AL450992.3-201ENST00000413192 568 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 RPS29P4-201ENST00000414733 161 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 AL138828.1-203ENST00000419926 1570 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 AC236972.2-201ENST00000434979 310 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 AL591473.1-201ENST00000464297 313 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 RPS29P25-201ENST00000481709 171 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 MIR4472-2-201ENST00000582069 67 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 AC009248.2-201ENST00000619826 254 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 MIR3662-201ENST00000637030 95 ntBASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.32□□□□□ -1.4
COL17A1Q9UMD9 ZNF562-201ENST00000293648 12380 ntTSL 2 BASIC6.31□□□□□ -1.4
COL17A1Q9UMD9 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL17A1Q9UMD9 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.31□□□□□ -1.4
COL17A1Q9UMD9 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL17A1Q9UMD9 TRIM51-201ENST00000244891 1329 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 134.9 ms