Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 PRDX4P1-201ENST00000507189 574 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AF131216.2-201ENST00000512316 564 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 RNU6-314P-201ENST00000516574 104 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 RN7SKP82-201ENST00000516786 223 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AF117829.1-202ENST00000524166 836 ntTSL 3 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 MTND4LP18-201ENST00000526864 291 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AC118273.2-201ENST00000532092 465 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 MAL2-203ENST00000534619 578 ntTSL 4 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AC069240.1-201ENST00000548774 375 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AL352984.1-201ENST00000556949 276 ntTSL 3 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AP005205.1-201ENST00000563503 508 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 MIR548S-201ENST00000581352 82 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 BNIP3P30-201ENST00000601184 574 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 BCRP9-201ENST00000605312 388 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AC098614.4-201ENST00000607601 462 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AP002360.3-201ENST00000607673 710 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 uc_338.13-201ENST00000618243 179 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AC072046.2-201ENST00000618366 268 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 MIR4727-201ENST00000622232 55 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AC124864.2-201ENST00000624736 186 ntBASIC4.46□□□□□ -1.7
DKK3Q9UBP4 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
DKK3Q9UBP4 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 PCDH15-211ENST00000395440 3177 ntTSL 5 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 LINC02471-203ENST00000641941 4752 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 OR2L13-201ENST00000358120 1942 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC008033.1-201ENST00000216407 1162 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 RNU5E-4P-201ENST00000364931 120 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 RNU1-63P-201ENST00000383902 164 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 SNORD115.1-201ENST00000391109 76 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 Y_RNA.608-201ENST00000410647 95 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AL139095.3-201ENST00000419672 1203 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC007742.1-201ENST00000425789 329 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 ELOCP26-201ENST00000436067 329 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 SKP1P1-201ENST00000438081 489 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 CBX1P1-201ENST00000440184 427 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 RABEPKP1-201ENST00000440529 1026 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 RPS26P56-201ENST00000444468 240 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 PHBP16-201ENST00000446318 950 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 WASF1P1-201ENST00000447560 1131 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AL590365.1-201ENST00000450788 243 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC026410.2-201ENST00000460281 156 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 RN7SL303P-201ENST00000469773 251 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC108022.1-201ENST00000493466 478 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 RN7SL812P-201ENST00000493791 279 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC099509.1-201ENST00000502437 652 ntTSL 2 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 NDUFB4P2-201ENST00000509515 391 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 RNU6-718P-201ENST00000516166 105 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 RNU6-430P-201ENST00000517078 107 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC104986.1-201ENST00000517978 436 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC013828.2-201ENST00000532487 235 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 NUDT7-203ENST00000563839 316 ntTSL 3 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC009977.1-201ENST00000586015 570 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AL161729.4-201ENST00000604650 476 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC113403.1-201ENST00000604910 193 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC007014.2-201ENST00000615581 479 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 AC136475.10-201ENST00000620253 385 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 OR52H1-202ENST00000641796 1061 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 PPP1R9A-205ENST00000424654 4058 ntTSL 5 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 EIF2AP4-201ENST00000424793 1781 ntBASIC4.45□□□□□ -1.7
DKK3Q9UBP4 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
DKK3Q9UBP4 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 ZFHX4-207ENST00000521891 14019 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
DKK3Q9UBP4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms