Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.18□□□□□ -2.06
CHD7Q9P2D1 RNA5SP480-201ENST00000516840 109 ntBASIC2.18□□□□□ -2.06
CHD7Q9P2D1 AC022960.2-201ENST00000616300 666 ntBASIC2.18□□□□□ -2.06
CHD7Q9P2D1 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.18□□□□□ -2.06
CHD7Q9P2D1 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.18□□□□□ -2.06
CHD7Q9P2D1 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
CHD7Q9P2D1 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHD7Q9P2D1 AL358453.1-201ENST00000422522 250 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 SNORD13-201ENST00000459299 104 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 PDCL2P2-201ENST00000533651 189 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 AC126177.3-201ENST00000551839 688 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 AL359198.2-201ENST00000611836 194 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.17□□□□□ -2.06
CHD7Q9P2D1 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC2.17□□□□□ -2.06
CHD7Q9P2D1 MTND4P35-201ENST00000604257 1375 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC2.17□□□□□ -2.06
CHD7Q9P2D1 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.17□□□□□ -2.06
CHD7Q9P2D1 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.17□□□□□ -2.06
CHD7Q9P2D1 Z73417.1-201ENST00000447373 778 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 AC133473.1-201ENST00000455173 299 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.17□□□□□ -2.06
CHD7Q9P2D1 ARL2BPP2-201ENST00000550907 489 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 MIR3683-201ENST00000580847 82 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 AL160394.1-201ENST00000624765 724 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.17□□□□□ -2.06
CHD7Q9P2D1 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CHD7Q9P2D1 AC009501.3-201ENST00000605001 1352 ntBASIC2.17□□□□□ -2.06
CHD7Q9P2D1 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHD7Q9P2D1 AC002524.1-201ENST00000411687 547 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 CR769767.1-201ENST00000436337 346 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.16□□□□□ -2.06
CHD7Q9P2D1 AC009487.2-201ENST00000420969 6821 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 ATP11C-202ENST00000361648 6010 ntAPPRIS ALT2 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHD7Q9P2D1 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC2.16□□□□□ -2.06
CHD7Q9P2D1 RPL36AP33-201ENST00000450395 310 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 AL445669.2-201ENST00000454425 421 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 ZDHHC20P3-201ENST00000531576 336 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 MIR6733-201ENST00000635723 61 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 STXBP4-201ENST00000376352 15590 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
CHD7Q9P2D1 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHD7Q9P2D1 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.16□□□□□ -2.06
CHD7Q9P2D1 ANKRD18EP-201ENST00000405487 2632 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 AC008264.2-201ENST00000610193 3731 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 RAD1P1-201ENST00000231383 813 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 Y_RNA.112-201ENST00000363250 102 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 RNU6-392P-201ENST00000364926 101 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.16□□□□□ -2.06
CHD7Q9P2D1 AC105918.1-201ENST00000474399 838 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 RPS27P27-201ENST00000498779 255 ntBASIC2.16□□□□□ -2.06
CHD7Q9P2D1 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.16□□□□□ -2.06
CHD7Q9P2D1 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC2.16□□□□□ -2.06
CHD7Q9P2D1 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.16□□□□□ -2.06
CHD7Q9P2D1 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.15□□□□□ -2.06
CHD7Q9P2D1 RPL23AP58-201ENST00000440453 469 ntBASIC2.15□□□□□ -2.07
CHD7Q9P2D1 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC2.15□□□□□ -2.07
CHD7Q9P2D1 HMGB3P8-201ENST00000449709 577 ntBASIC2.15□□□□□ -2.07
CHD7Q9P2D1 RPL23AP63-201ENST00000498752 471 ntBASIC2.15□□□□□ -2.07
CHD7Q9P2D1 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC2.15□□□□□ -2.07
CHD7Q9P2D1 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.15□□□□□ -2.07
CHD7Q9P2D1 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.15□□□□□ -2.07
CHD7Q9P2D1 AL450489.1-201ENST00000612071 468 ntBASIC2.15□□□□□ -2.07
CHD7Q9P2D1 AC091834.1-201ENST00000614543 472 ntBASIC2.15□□□□□ -2.07
CHD7Q9P2D1 ROCK1P1-203ENST00000608049 2457 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
CHD7Q9P2D1 OR4K2-204ENST00000641885 8681 ntAPPRIS P1 BASIC2.15□□□□□ -2.07
CHD7Q9P2D1 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.15□□□□□ -2.07
CHD7Q9P2D1 U8.8-201ENST00000365399 135 ntBASIC2.15□□□□□ -2.07
CHD7Q9P2D1 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.15□□□□□ -2.07
CHD7Q9P2D1 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.15□□□□□ -2.07
CHD7Q9P2D1 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHD7Q9P2D1 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC2.15□□□□□ -2.07
CHD7Q9P2D1 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
CHD7Q9P2D1 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
CHD7Q9P2D1 AP005901.5-201ENST00000545779 1796 ntBASIC2.15□□□□□ -2.07
CHD7Q9P2D1 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 RNA5SP490-201ENST00000517141 136 ntBASIC2.14□□□□□ -2.07
CHD7Q9P2D1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 OOSP1P2-201ENST00000579644 351 ntBASIC2.14□□□□□ -2.07
CHD7Q9P2D1 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
CHD7Q9P2D1 SNORD21-201ENST00000383953 95 ntBASIC2.13□□□□□ -2.07
CHD7Q9P2D1 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.13□□□□□ -2.07
CHD7Q9P2D1 AC080013.2-201ENST00000460866 323 ntBASIC2.13□□□□□ -2.07
CHD7Q9P2D1 RN7SL283P-201ENST00000489055 303 ntBASIC2.13□□□□□ -2.07
CHD7Q9P2D1 NDUFA5P6-201ENST00000542110 379 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 98 ms