Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AC104472.2-201ENST00000469035 601 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AC034236.1-201ENST00000469891 373 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 SNORA31.8-201ENST00000516327 108 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AC034105.4-201ENST00000568304 277 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AC023824.3-201ENST00000569003 562 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AC090666.1-201ENST00000578241 445 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AP004247.3-201ENST00000608682 624 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 MIR7975-201ENST00000619350 68 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AC015967.1-201ENST00000619893 476 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 MIR6733-201ENST00000635723 61 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC2.75□□□□□ -1.97
VAPAQ9P0L0 AP003122.5-201ENST00000527668 3766 ntBASIC2.75□□□□□ -1.97
VAPAQ9P0L0 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AL136520.1-201ENST00000600311 1322 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 PHTF2-201ENST00000248550 4778 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 OR5T3-201ENST00000303059 1023 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 SNORA63.1-201ENST00000362493 131 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 RNU6-1074P-201ENST00000383995 104 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 RPL21P75-201ENST00000396599 483 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 RPL21P28-201ENST00000401418 483 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AL592114.1-201ENST00000403842 483 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 ZFAND6P1-201ENST00000434138 605 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 OR6K1P-201ENST00000456766 971 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 RNA5SP310-201ENST00000459084 116 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 RPL21P39-201ENST00000463605 483 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AC011979.1-201ENST00000472300 483 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 RPL21P93-201ENST00000480465 489 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AC233702.1-201ENST00000482905 502 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AC087190.1-201ENST00000484462 480 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AC093591.1-201ENST00000491435 481 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 RPL21P129-201ENST00000491732 478 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 RPL21P16-201ENST00000495531 483 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 MLLT10P2-201ENST00000506434 249 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 CCNG2P1-201ENST00000549521 1000 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 LSM6P2-201ENST00000552208 177 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 MTATP6P25-201ENST00000574491 261 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AC006504.3-201ENST00000586818 523 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AC040168.1-201ENST00000623594 991 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 POMP-202ENST00000460403 1428 ntTSL 3 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 MAPK10-322ENST00000641485 4530 ntBASIC2.74□□□□□ -1.97
VAPAQ9P0L0 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.74□□□□□ -1.97
VAPAQ9P0L0 AC130650.2-201ENST00000618736 2403 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AC092447.7-201ENST00000422212 1621 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 OR5H2-201ENST00000355273 945 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 SNORA62.3-201ENST00000365110 153 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 CRP-202ENST00000368110 667 ntTSL 3 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 MIR512-1-201ENST00000384913 84 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 MOB4-205ENST00000409916 829 ntTSL 3 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 SSXP9-201ENST00000417503 292 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AC069157.1-201ENST00000421749 137 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 VN1R42P-201ENST00000424651 344 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 RNFT1P2-201ENST00000443064 757 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 RPL23AP31-201ENST00000456160 467 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 MTND3P24-201ENST00000506306 329 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AC098799.2-201ENST00000509466 868 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AC092593.2-201ENST00000513866 913 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 SNORA31.1-201ENST00000515993 133 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 SNORA31.5-201ENST00000516190 133 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 RN7SKP272-201ENST00000516988 232 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 TMEM68-214ENST00000523073 536 ntTSL 3 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 FAM60DP-201ENST00000524174 632 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AL391156.1-201ENST00000554965 554 ntBASIC2.73□□□□□ -1.97
VAPAQ9P0L0 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 LINC02185-202ENST00000576797 568 ntTSL 3 BASIC2.73□□□□□ -1.97
VAPAQ9P0L0 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.73□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 79.1 ms