Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 UBA52P6-201ENST00000399822 382 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 UBE2D3P2-201ENST00000424409 445 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 USP9YP36-201ENST00000424581 829 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AL357552.1-201ENST00000445254 415 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC097262.1-201ENST00000452559 548 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 RPS4XP6-201ENST00000477670 797 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC068724.1-201ENST00000487100 792 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 RNA5SP380-201ENST00000517190 98 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC239860.2-201ENST00000525886 270 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC011611.5-201ENST00000552477 578 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC107294.3-201ENST00000609211 526 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AC106028.5-201ENST00000610332 395 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AL162274.2-201ENST00000614406 332 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 MIR6076-201ENST00000617521 113 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AP003122.6-201ENST00000623831 495 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AP002907.1-201ENST00000606361 1430 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 AL049780.3-201ENST00000624612 1583 ntBASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
TM9SF3Q9HD45 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 RPL23AP57-201ENST00000332361 466 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 SNORD82-201ENST00000365530 70 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 U3.26-201ENST00000391236 204 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC063979.1-201ENST00000415539 377 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AL353678.1-201ENST00000422735 741 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 TRIM60P18-201ENST00000441518 828 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 NDUFA5P7-201ENST00000452914 242 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 MTCO3P2-201ENST00000457365 171 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 RNA5SP310-201ENST00000459084 116 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 NAP1L1P3-201ENST00000462291 880 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC021205.2-201ENST00000480069 347 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC092185.1-201ENST00000491371 97 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC112198.1-201ENST00000505369 1220 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC079148.1-201ENST00000565944 819 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC008507.1-201ENST00000587506 734 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 GAS5-AS1-201ENST00000602767 694 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 BNIP3P11-201ENST00000603878 563 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC106791.2-201ENST00000604680 391 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC009948.4-201ENST00000604692 675 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AL137843.1-201ENST00000605078 385 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 AC040168.1-201ENST00000623594 991 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 MTND5P27-201ENST00000428871 1720 ntBASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
TM9SF3Q9HD45 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 RNU6-115P-201ENST00000364310 107 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 SNORA14A-201ENST00000364773 135 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 SLC9B1P2-201ENST00000398120 1184 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 CYCSP45-201ENST00000402289 315 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 GSTA8P-201ENST00000404253 637 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 RNU4-47P-201ENST00000410876 114 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AL121882.1-201ENST00000422893 417 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 RPL7P55-201ENST00000450522 746 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 S100A11P2-201ENST00000467589 312 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 RPL27AP5-201ENST00000469428 449 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 RPS3AP43-201ENST00000479743 781 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 MTND3P24-201ENST00000506306 329 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 FABP5P12-201ENST00000515543 389 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 RNA5SP341-201ENST00000516261 117 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 SNORA70.19-201ENST00000516717 90 ntBASIC3.31□□□□□ -1.88
TM9SF3Q9HD45 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 112.2 ms