Protein–RNA interactions for Protein: Q9HCM9

TRIM39, E3 ubiquitin-protein ligase TRIM39, humanhuman

Predictions only

Length 518 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39Q9HCM9 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 USP12PX-201ENST00000432383 1057 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AL121601.2-201ENST00000438019 707 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AC068491.2-201ENST00000438897 617 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 DDX3P2-201ENST00000446138 111 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 RNU7-63P-201ENST00000459054 62 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 snoU13.3-201ENST00000459441 104 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 RPL23AP56-201ENST00000460778 453 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AC022795.1-201ENST00000473808 480 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 SCARNA24.1-201ENST00000516465 137 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 RNU7-51P-201ENST00000516560 62 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 SNORA20.3-201ENST00000516880 132 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AC008694.2-201ENST00000517591 306 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AC105031.1-201ENST00000518550 476 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AC034105.3-201ENST00000565294 442 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 GLUD1P4-201ENST00000590914 418 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AC020910.3-201ENST00000603701 874 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AC087385.3-201ENST00000620477 187 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 YWHAEP7-203ENST00000622054 312 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AP003122.6-201ENST00000623831 495 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 AC006065.6-201ENST00000625201 545 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 MAPK10-320ENST00000641462 6696 ntBASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.86□□□□□ -1.63
TRIM39Q9HCM9 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC244517.1-201ENST00000606030 2086 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 FUT9-201ENST00000302103 12783 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 OR2AH1P-201ENST00000425717 928 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC092162.1-201ENST00000432828 434 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AL606489.2-201ENST00000433886 234 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 RPS20P5-201ENST00000434808 360 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 RN7SL517P-201ENST00000462240 305 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC093278.1-201ENST00000494700 600 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC098799.2-201ENST00000509466 868 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC114797.1-201ENST00000514003 728 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 Y_RNA.719-201ENST00000517156 106 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AF235103.2-201ENST00000525753 346 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC128657.1-201ENST00000549459 145 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AP001429.1-201ENST00000602568 530 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC012409.3-201ENST00000611343 981 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC093838.1-201ENST00000613014 469 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC073869.10-201ENST00000642016 354 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 MAPK10-353ENST00000641803 8483 ntAPPRIS P2 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC100778.3-201ENST00000580060 1750 ntBASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
TRIM39Q9HCM9 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 PAPPA-AS1-201ENST00000445861 2450 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 MTND5P3-201ENST00000438536 1800 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 DHX40P1-201ENST00000588725 1412 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 RNU6-1249P-201ENST00000363237 111 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 RNY3P3-201ENST00000363816 102 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 RNU6-606P-201ENST00000384721 111 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 RNU6-754P-201ENST00000391166 107 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 AL109755.1-201ENST00000401791 649 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 MIR1271-201ENST00000408537 86 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 RNU6-908P-201ENST00000410160 94 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 RNU4-65P-201ENST00000410473 140 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 RNA5SP345-201ENST00000410646 108 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 SNRPFP1-201ENST00000414761 252 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 TBCAP2-201ENST00000416175 326 ntBASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.84□□□□□ -1.63
TRIM39Q9HCM9 MED13P1-201ENST00000428342 171 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms