Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 MIR591-201ENST00000385290 95 ntBASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 SAR1AP2-201ENST00000392696 594 ntBASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 AC023347.2-201ENST00000433994 462 ntBASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 AC004917.1-201ENST00000490856 575 ntTSL 4 BASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 AC008565.1-201ENST00000509046 885 ntBASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 AC025881.1-201ENST00000518851 512 ntBASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 EIF5A2P1-201ENST00000564027 460 ntBASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 AC061975.8-201ENST00000587058 721 ntBASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 AC112503.1-201ENST00000608436 391 ntBASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 AC138649.5-201ENST00000637456 137 ntBASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 CUL1P1-201ENST00000509510 2425 ntBASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.22□□□□□ -2.05
KIAA1549Q9HCM3 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 RNA5SP432-201ENST00000362480 116 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 SNORA41-201ENST00000384675 132 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 MIR27B-201ENST00000385129 97 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 AL445529.1-201ENST00000398713 389 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 RPL31P2-201ENST00000413849 377 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 AC133134.1-201ENST00000466800 359 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 RPL23AP45-201ENST00000476406 468 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 MTND4LP22-201ENST00000508209 276 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 KLHL2P1-201ENST00000508691 521 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 RPL23AP84-201ENST00000571193 464 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 AC034268.2-201ENST00000571784 482 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 AC073348.1-201ENST00000623002 331 ntBASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.21□□□□□ -2.05
KIAA1549Q9HCM3 ZNF470-202ENST00000391709 6601 ntAPPRIS P1 TSL 5 BASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 MTND5P3-201ENST00000438536 1800 ntBASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 AC011978.2-201ENST00000569835 2054 ntBASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 DNAJC19P6-201ENST00000401853 280 ntBASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 Z99127.2-201ENST00000441426 334 ntBASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 RPS27AP1-201ENST00000475545 471 ntBASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 SNORA31.1-201ENST00000515993 133 ntBASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 SNORA31.5-201ENST00000516190 133 ntBASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 AC012182.1-201ENST00000570133 895 ntBASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 AC025034.2-201ENST00000623264 286 ntBASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 AC022031.1-201ENST00000585985 2593 ntBASIC2.21□□□□□ -2.06
KIAA1549Q9HCM3 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 AC104332.2-201ENST00000429959 156 ntBASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 SETP8-201ENST00000435341 628 ntBASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 HMGN2P20-201ENST00000437531 273 ntBASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 MTCYBP14-201ENST00000457471 715 ntBASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 RN7SKP234-201ENST00000517173 224 ntBASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 MIR4435-1-201ENST00000582552 80 ntBASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.2□□□□□ -2.06
KIAA1549Q9HCM3 SNORA36C-201ENST00000384289 132 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 RNA5SP425-201ENST00000410336 112 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AP000705.1-201ENST00000454567 350 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 MTND3P6-201ENST00000485242 339 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 RPL36AP51-201ENST00000487216 318 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 OR5H5P-201ENST00000503164 928 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AC017037.2-201ENST00000513850 890 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 RNU6-826P-201ENST00000516827 104 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 RPL23AP88-201ENST00000605759 454 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 MIR6715A-201ENST00000615929 79 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AC006020.1-201ENST00000420179 1854 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 XKRYP4-201ENST00000414395 483 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AL513175.2-201ENST00000422071 443 ntBASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC2.19□□□□□ -2.06
KIAA1549Q9HCM3 MED6P1-201ENST00000439659 713 ntBASIC2.19□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms