Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 KRR1P1-201ENST00000419430 803 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AC069157.1-201ENST00000421749 137 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 RPF2P1-201ENST00000424137 906 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 UBE2V1P6-201ENST00000430840 422 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AL159987.2-201ENST00000432754 307 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 FTH1P1-201ENST00000437933 532 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 MTCO1P48-201ENST00000448024 1096 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 ELOCP23-201ENST00000452014 332 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AC110794.1-201ENST00000505816 425 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 SNORA31.1-201ENST00000515993 133 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 SNORA31.5-201ENST00000516190 133 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 SNORA67.7-201ENST00000516664 135 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AC087272.1-201ENST00000523624 533 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AC093510.2-201ENST00000562820 896 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AC053481.3-201ENST00000577881 843 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 MIR2682-201ENST00000580305 110 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AP001542.2-201ENST00000593141 364 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AC073387.2-201ENST00000604797 784 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 uc_338.25-201ENST00000613756 156 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 AC139713.2-210ENST00000641741 992 ntBASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.25□□□□□ -1.89
LRRC40Q9H9A6 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AC007899.1-201ENST00000412776 775 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 BOLA3P4-201ENST00000418151 400 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 RPL7P46-201ENST00000425129 740 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 MTCO1P39-201ENST00000426148 480 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AC092017.2-201ENST00000427600 362 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AL050321.1-201ENST00000432363 400 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 SNORA84-201ENST00000459229 133 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AP002812.1-201ENST00000495378 474 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 CBX3P3-201ENST00000508108 532 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 RNU6-1095P-201ENST00000516148 108 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 RNA5SP380-201ENST00000517190 98 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AC245166.1-201ENST00000521012 253 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AC008127.2-201ENST00000549925 1075 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 OR4H12P-201ENST00000556269 907 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 RPL21P12-201ENST00000559810 515 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 ZNF971P-201ENST00000562068 1249 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 CKS1BP3-201ENST00000600888 237 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AC005776.1-201ENST00000603164 290 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AP003973.1-201ENST00000604639 691 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AC245389.1-201ENST00000605141 529 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AC107294.3-201ENST00000609211 526 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AC009570.1-201ENST00000609599 745 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AL353748.2-201ENST00000622148 471 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 CYP3A51P-201ENST00000633513 256 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 MFSD8-245ENST00000641743 948 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AP002907.1-201ENST00000606361 1430 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 AL512283.1-201ENST00000606756 1384 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 MTCO1P12-201ENST00000414273 1543 ntBASIC3.24□□□□□ -1.89
LRRC40Q9H9A6 MTND5P24-201ENST00000438892 1767 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 TAF9BP1-201ENST00000396646 746 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 FAT1P1-201ENST00000406588 507 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 RPS15AP38-201ENST00000413110 372 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC063979.1-201ENST00000415539 377 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 SSXP9-201ENST00000417503 292 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 FO393414.1-201ENST00000428697 1184 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC097713.2-201ENST00000430199 356 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC000041.1-201ENST00000439655 175 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AL589880.1-201ENST00000448271 287 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC104472.2-201ENST00000469035 601 ntBASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.23□□□□□ -1.89
LRRC40Q9H9A6 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms