Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 AL109933.2-201ENST00000452651 260 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM4Q9C037 RN7SL633P-201ENST00000488974 297 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.88□□□□□ -1.95
TRIM4Q9C037 TBCAP3-201ENST00000512475 312 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 AC108120.2-201ENST00000512973 294 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 Y_RNA.673-201ENST00000516306 88 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 IGKV2-36-201ENST00000519999 223 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC2.88□□□□□ -1.95
TRIM4Q9C037 SNRPGP15-201ENST00000600149 222 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 AC007318.2-201ENST00000620999 243 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 MIR4496-201ENST00000635896 61 ntBASIC2.88□□□□□ -1.95
TRIM4Q9C037 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC2.88□□□□□ -1.95
TRIM4Q9C037 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.88□□□□□ -1.95
TRIM4Q9C037 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC2.87□□□□□ -1.95
TRIM4Q9C037 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM4Q9C037 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM4Q9C037 RPL9P7-201ENST00000330965 580 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 AC062016.1-201ENST00000355719 319 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC2.87□□□□□ -1.95
TRIM4Q9C037 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM4Q9C037 AC073508.1-201ENST00000428866 656 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 AL139132.1-201ENST00000431587 344 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.87□□□□□ -1.95
TRIM4Q9C037 AC112492.1-201ENST00000449607 712 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.87□□□□□ -1.95
TRIM4Q9C037 NECAP1P2-201ENST00000455668 727 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 AC104472.2-201ENST00000469035 601 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 PRDX3P4-201ENST00000470828 747 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC2.87□□□□□ -1.95
TRIM4Q9C037 SEM1P1-201ENST00000506694 209 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 AC005351.1-201ENST00000511152 786 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 AC025857.1-201ENST00000525252 377 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 SNORD84-203ENST00000584275 78 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 AL356575.1-201ENST00000603008 283 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 ATP1B3P1-201ENST00000605365 821 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 AC026790.2-201ENST00000606282 430 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 AL020991.1-201ENST00000612314 373 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 AC099506.2-201ENST00000623074 221 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 MIR622-201ENST00000638396 96 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
TRIM4Q9C037 GABRG2-229ENST00000641017 3628 ntBASIC2.87□□□□□ -1.95
TRIM4Q9C037 AC234782.4-201ENST00000417646 1048 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 RPS15AP40-201ENST00000419621 391 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 AC093156.1-201ENST00000440382 670 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 AL592437.1-201ENST00000443781 492 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM4Q9C037 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 snoU13.26-201ENST00000459452 105 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 DYNLL1P6-201ENST00000503440 264 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 MTND2P26-201ENST00000528255 1029 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM4Q9C037 AC090616.5-202ENST00000582111 297 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 AC005242.1-201ENST00000585658 438 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 AL049779.4-201ENST00000604500 156 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 AC019159.1-201ENST00000605094 187 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 HMGB1P51-201ENST00000605166 638 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 AC007619.2-201ENST00000605743 379 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 AC245100.7-201ENST00000609678 442 ntBASIC2.86□□□□□ -1.95
TRIM4Q9C037 NEB-203ENST00000397345 26202 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 NEB-209ENST00000427231 26202 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
TRIM4Q9C037 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
TRIM4Q9C037 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM4Q9C037 STAU2-201ENST00000355780 4061 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM4Q9C037 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.85□□□□□ -1.95
TRIM4Q9C037 FAM133CP-201ENST00000332869 704 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 SNORA25.6-201ENST00000364121 118 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 FO393413.1-201ENST00000402892 195 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 AC105402.1-201ENST00000413336 545 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM4Q9C037 AC129850.1-201ENST00000436203 508 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 RPS29P6-201ENST00000438196 145 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 RPS24P13-201ENST00000442520 397 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 AC023512.1-201ENST00000444513 499 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 RPL7P36-201ENST00000444633 681 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 AL590399.6-201ENST00000446396 307 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM4Q9C037 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC2.85□□□□□ -1.95
TRIM4Q9C037 HMGB1P41-201ENST00000520234 440 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 EEF1A1P37-201ENST00000522748 715 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC2.85□□□□□ -1.95
TRIM4Q9C037 MTCYBP41-201ENST00000528913 1123 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 AP000857.1-201ENST00000532151 543 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.85□□□□□ -1.95
TRIM4Q9C037 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
TRIM4Q9C037 AL645568.2-201ENST00000432815 1337 ntBASIC2.85□□□□□ -1.95
TRIM4Q9C037 AP003122.5-201ENST00000527668 3766 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 91.8 ms