Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC092140.2-201ENST00000618027 521 ntBASIC4.9□□□□□ -1.63
RTFDC1Q9BY42 AC012314.7-201ENST00000619693 93 ntBASIC4.9□□□□□ -1.63
RTFDC1Q9BY42 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.9□□□□□ -1.63
RTFDC1Q9BY42 AL357559.1-201ENST00000622228 274 ntBASIC4.9□□□□□ -1.63
RTFDC1Q9BY42 AC040168.1-201ENST00000623594 991 ntBASIC4.9□□□□□ -1.63
RTFDC1Q9BY42 AP005264.7-201ENST00000625003 745 ntBASIC4.9□□□□□ -1.63
RTFDC1Q9BY42 AC093591.3-201ENST00000634516 308 ntBASIC4.9□□□□□ -1.63
RTFDC1Q9BY42 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC4.9□□□□□ -1.63
RTFDC1Q9BY42 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
RTFDC1Q9BY42 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
RTFDC1Q9BY42 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.9□□□□□ -1.63
RTFDC1Q9BY42 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
RTFDC1Q9BY42 EEF1A1-211ENST00000615060 3508 ntTSL 5 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 STK31-205ENST00000433467 3085 ntTSL 2 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AC067945.1-201ENST00000342609 618 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 RNU5F-6P-201ENST00000362979 116 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 RNU6-623P-201ENST00000363143 105 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AL356421.1-201ENST00000403255 413 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 SNORA3.3-201ENST00000408712 125 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 CYCSP46-201ENST00000423569 204 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AC091390.3-201ENST00000426478 338 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AC108734.1-201ENST00000439549 399 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AL445669.2-201ENST00000454425 421 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 SNRPGP9-201ENST00000456025 225 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 MTCO2P18-201ENST00000457151 658 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AP000797.1-201ENST00000478870 387 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 RNA5SP179-201ENST00000517284 121 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AC100770.1-201ENST00000532310 322 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 SETP2-201ENST00000553886 926 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 GTF2IP22-201ENST00000554443 182 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 ZNF573-209ENST00000585724 453 ntTSL 5 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 TPMTP1-201ENST00000592307 737 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AC064872.1-201ENST00000604823 1072 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AL451044.1-201ENST00000604867 238 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AC091167.4-201ENST00000605079 184 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AC128687.1-201ENST00000605304 619 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AL391261.4-201ENST00000616012 481 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AC015967.1-201ENST00000619893 476 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 AC091925.2-201ENST00000625059 256 ntBASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RTFDC1Q9BY42 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 MAPK10-320ENST00000641462 6696 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 CRISP1-202ENST00000335847 1911 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 RNU6-97P-201ENST00000363387 104 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 RNU6-525P-201ENST00000363685 104 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 RNU6-1279P-201ENST00000383917 103 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 U1.1-201ENST00000384101 164 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 RNY3P10-201ENST00000384764 102 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 PTMAP5-201ENST00000393073 333 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 PDSS1P1-201ENST00000422953 1114 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 MRPS18BP2-201ENST00000434310 759 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 LARP1BP3-201ENST00000437229 869 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 RSU1P2-202ENST00000437884 485 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AL360221.1-201ENST00000445989 335 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 COX6CP12-201ENST00000446748 202 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AP000542.1-201ENST00000448473 371 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 MTCO3P7-201ENST00000510008 774 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AC091965.2-201ENST00000512324 613 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 SCARNA14-201ENST00000516903 136 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AC008694.2-201ENST00000517591 306 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AC025881.1-201ENST00000518851 512 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AC073544.2-201ENST00000601155 540 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AL049634.3-201ENST00000604968 457 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AC025594.3-201ENST00000613068 790 ntBASIC4.88□□□□□ -1.63
RTFDC1Q9BY42 AC009237.17-201ENST00000618111 748 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 120.3 ms