Protein–RNA interactions for Protein: Q9BWF2

TRAIP, E3 ubiquitin-protein ligase TRAIP, humanhuman

Predictions only

Length 469 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIPQ9BWF2 U3.36-201ENST00000408418 213 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 TOMM22P1-201ENST00000418578 312 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 NDUFS5P3-201ENST00000450668 321 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 RPL7AP6-201ENST00000477943 801 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 BX284632.1-201ENST00000478218 541 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 RN7SL826P-201ENST00000479724 288 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 RNA5SP373-201ENST00000517271 95 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 MIR3921-201ENST00000577308 85 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 AP005403.1-201ENST00000579720 229 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 BNIP3P30-201ENST00000601184 574 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 AC004696.1-201ENST00000614345 607 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 AL355810.1-201ENST00000614629 552 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 AC011155.2-201ENST00000623202 216 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 ASNSP3-201ENST00000451989 1306 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 STARD9-201ENST00000290607 15567 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 AL592182.3-201ENST00000642132 3304 ntBASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
TRAIPQ9BWF2 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 UTS2B-201ENST00000340524 2395 ntAPPRIS P1 TSL 2 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 CBX3P1-201ENST00000325243 554 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 RNU6-552P-201ENST00000362869 119 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 Y_RNA.576-201ENST00000384781 102 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 SOD2P1-201ENST00000396543 562 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 GPS2P1-201ENST00000411761 986 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 RSU1P3-201ENST00000412878 835 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 EEF1A1P40-201ENST00000412883 573 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 EI24P4-201ENST00000423683 1078 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 CEACAMP7-201ENST00000444105 496 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 CBWD4P-201ENST00000445695 655 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AC020550.1-201ENST00000447385 163 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 RPS4XP20-201ENST00000505751 772 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AC097515.1-202ENST00000511818 371 ntTSL 3 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 RN7SKP258-201ENST00000517151 304 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 SUB1P1-201ENST00000524415 382 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AC012181.3-201ENST00000565861 601 ntTSL 4 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AC024619.4-201ENST00000580924 316 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 RN7SL356P-201ENST00000582228 248 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AC011447.4-201ENST00000587562 111 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 UBE2V2P2-201ENST00000587677 504 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AC006116.3-201ENST00000592968 361 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AC087763.1-201ENST00000603391 286 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AP002360.3-201ENST00000607673 710 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AL139124.1-201ENST00000609123 421 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AL365204.3-201ENST00000612448 685 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AP001486.3-201ENST00000615334 372 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 AC100810.6-201ENST00000638068 285 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 PRO1804-201ENST00000623780 2050 ntBASIC5.86□□□□□ -1.47
TRAIPQ9BWF2 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC018809.2-201ENST00000602436 3823 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 AC131971.1-201ENST00000332881 1482 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 OR10G4-203ENST00000641722 3301 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 OR8B3-202ENST00000641139 2170 ntAPPRIS P1 BASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 RNU1-43P-201ENST00000365052 165 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 RNU4-66P-201ENST00000365199 138 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 SNORA36C-201ENST00000384289 132 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 RNU1-106P-201ENST00000384382 164 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 MIR607-201ENST00000385241 96 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 RNU6-1009P-201ENST00000390996 107 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 RNU6-903P-201ENST00000391270 109 ntBASIC5.85□□□□□ -1.47
TRAIPQ9BWF2 LAP3P1-201ENST00000403648 294 ntBASIC5.85□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms