Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC090615.1-201ENST00000577519 154 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC068790.6-201ENST00000602558 258 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AL031666.3-201ENST00000609320 1006 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC105429.2-201ENST00000610567 517 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 AC100793.4-201ENST00000613683 429 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 MTND4P26-201ENST00000415971 1359 ntBASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
PAAF1Q9BRP4 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 SNORA71.3-201ENST00000362582 128 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 RNU6-853P-201ENST00000364306 107 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 RNU6-343P-201ENST00000364709 104 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 RNU6-533P-201ENST00000384144 107 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 RNU6-1042P-201ENST00000384204 107 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 RNU6-769P-201ENST00000384407 104 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 Y_RNA.493-201ENST00000384422 102 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 DEFB108C-201ENST00000400154 252 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 RN7SKP156-201ENST00000410308 342 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AL356583.2-201ENST00000426536 280 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 HLA-N-201ENST00000437516 135 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 RPL22P17-201ENST00000438729 315 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 GDI2P2-201ENST00000445131 608 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AP000542.1-201ENST00000448473 371 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AL133547.1-201ENST00000448546 220 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AL590365.1-201ENST00000450788 243 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 BTF3P5-201ENST00000457252 467 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 RPS4XP10-201ENST00000465034 731 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 OR5H5P-201ENST00000503164 928 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AC113430.1-201ENST00000506872 718 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 TXNP6-201ENST00000510190 310 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AC025437.2-201ENST00000518103 548 ntTSL 4 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 IGHV3-32-201ENST00000519182 355 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AC087369.1-201ENST00000520775 996 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AP002963.1-201ENST00000530590 184 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AC087499.8-201ENST00000578406 226 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 BNIP3P8-201ENST00000597863 560 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 LLPHP1-201ENST00000603571 367 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AC091965.4-201ENST00000607691 587 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 MESTIT1_2.1-201ENST00000616328 235 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AC138932.5-201ENST00000617759 563 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AC099842.1-201ENST00000619919 596 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 USP44-208ENST00000552440 1818 ntTSL 5 BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 HSP90AA5P-201ENST00000438353 2192 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 AL359893.1-201ENST00000447628 1580 ntBASIC4.23□□□□□ -1.73
PAAF1Q9BRP4 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 5S_rRNA.1-201ENST00000364415 116 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 RNU6-1119P-201ENST00000384349 108 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 SNORA40.3-201ENST00000390964 122 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 Y_RNA.598-201ENST00000410480 95 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AC105271.1-202ENST00000411417 445 ntTSL 3 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 PDSS1P1-201ENST00000422953 1114 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AL513174.1-201ENST00000423182 629 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AC109583.1-201ENST00000432156 268 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 CKS1BP5-201ENST00000434172 273 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AL592447.1-201ENST00000447592 540 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 NANOGP10-201ENST00000453325 895 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 MTCO1P42-201ENST00000457379 726 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 ACTR3P3-201ENST00000480448 893 ntBASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AC107027.1-201ENST00000503006 575 ntTSL 2 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 CTD-2350J17.1-202ENST00000510456 360 ntTSL 2 BASIC4.22□□□□□ -1.73
PAAF1Q9BRP4 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 111.2 ms