Protein–RNA interactions for Protein: Q96MX0

CMTM3, CKLF-like MARVEL transmembrane domain-containing protein 3, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3Q96MX0 UBE2L4-201ENST00000587688 464 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AC104534.1-201ENST00000594558 566 ntTSL 4 BASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AC104662.1-201ENST00000604448 511 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AL034351.1-201ENST00000605288 668 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AC091965.4-201ENST00000607691 587 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AL392048.1-201ENST00000613946 534 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AL021997.2-201ENST00000615674 271 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AC022079.1-201ENST00000621546 602 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AC009268.2-201ENST00000621925 457 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AC008443.7-201ENST00000622195 246 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AL158801.5-201ENST00000623123 465 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AC095031.1-201ENST00000623685 672 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 CCT5-215ENST00000625723 135 ntTSL 5 BASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AC244258.1-201ENST00000637553 1071 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CMTM3Q96MX0 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CMTM3Q96MX0 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CMTM3Q96MX0 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.68□□□□□ -1.82
CMTM3Q96MX0 INTS6P1-201ENST00000504674 2530 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 CCPG1-202ENST00000425574 1945 ntTSL 2 BASIC3.68□□□□□ -1.82
CMTM3Q96MX0 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.68□□□□□ -1.82
CMTM3Q96MX0 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.68□□□□□ -1.82
CMTM3Q96MX0 AC012321.1-201ENST00000561622 1588 ntBASIC3.68□□□□□ -1.82
CMTM3Q96MX0 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 MTND5P33-201ENST00000571250 1450 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 RNA5SP175-201ENST00000364275 119 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 ARGLU1-202ENST00000375926 821 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 RNU6-637P-201ENST00000384050 107 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 U8.14-201ENST00000390843 143 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC109780.2-201ENST00000413467 845 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 COX6B1P1-201ENST00000415962 213 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 BX510359.3-201ENST00000422168 306 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 RPL21P109-201ENST00000422213 475 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC096638.2-201ENST00000434965 711 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC090774.1-201ENST00000435925 246 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC098824.1-201ENST00000453565 980 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 SBDSP1-204ENST00000453858 737 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 RPL35AP15-201ENST00000468042 339 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC004453.1-201ENST00000487895 408 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 RPL31P61-201ENST00000496160 376 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC106038.2-201ENST00000520706 568 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 SYF2P1-201ENST00000550658 413 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC091489.2-201ENST00000566263 604 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC060771.1-201ENST00000582031 164 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AP001029.3-201ENST00000588063 596 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC016769.4-201ENST00000616893 535 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 MIR6853-201ENST00000619642 74 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 PLCE1P1-201ENST00000622094 305 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC243312.2-201ENST00000623340 601 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC007494.3-201ENST00000624660 743 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 Z82217.1-201ENST00000625157 8149 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CMTM3Q96MX0 AL513185.3-201ENST00000433335 1300 ntBASIC3.67□□□□□ -1.82
CMTM3Q96MX0 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 RNA5SP123-201ENST00000363244 119 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AL645927.1-201ENST00000396783 406 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC3.66□□□□□ -1.82
CMTM3Q96MX0 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.66□□□□□ -1.82
CMTM3Q96MX0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms