Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.58□□□□□ -1.84
ZNF560Q96MR9 MIR3912-201ENST00000577566 105 ntBASIC3.58□□□□□ -1.84
ZNF560Q96MR9 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.58□□□□□ -1.84
ZNF560Q96MR9 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC3.58□□□□□ -1.84
ZNF560Q96MR9 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.58□□□□□ -1.84
ZNF560Q96MR9 XIAPP1-201ENST00000603162 600 ntBASIC3.58□□□□□ -1.84
ZNF560Q96MR9 AC012468.1-201ENST00000604888 430 ntBASIC3.58□□□□□ -1.84
ZNF560Q96MR9 AP001521.1-201ENST00000609150 300 ntBASIC3.58□□□□□ -1.84
ZNF560Q96MR9 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.58□□□□□ -1.84
ZNF560Q96MR9 AC099778.2-201ENST00000610904 211 ntBASIC3.58□□□□□ -1.84
ZNF560Q96MR9 AC104985.3-201ENST00000623479 597 ntBASIC3.58□□□□□ -1.84
ZNF560Q96MR9 AC013437.2-201ENST00000639587 677 ntBASIC3.58□□□□□ -1.84
ZNF560Q96MR9 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
ZNF560Q96MR9 AC021755.1-201ENST00000559747 1447 ntBASIC3.58□□□□□ -1.84
ZNF560Q96MR9 MTCO1P23-201ENST00000415223 1526 ntBASIC3.58□□□□□ -1.84
ZNF560Q96MR9 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
ZNF560Q96MR9 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF560Q96MR9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
ZNF560Q96MR9 AC005183.1-201ENST00000603687 1979 ntBASIC3.58□□□□□ -1.84
ZNF560Q96MR9 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 RNU4-51P-201ENST00000364206 140 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 RNU6-657P-201ENST00000383904 107 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 RNA5SP120-201ENST00000410900 112 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AL356968.1-201ENST00000416622 474 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AC005300.1-201ENST00000428401 373 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 USP9YP22-201ENST00000438971 294 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 RPL7P52-201ENST00000449200 742 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 SLC31A1P1-201ENST00000451221 567 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AL445669.2-201ENST00000454425 421 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 HMGB1P25-201ENST00000468402 607 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AC069528.1-202ENST00000482888 637 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AP005901.5-201ENST00000545779 1796 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 EEF1B2P4-201ENST00000551398 348 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 TGIF1P1-201ENST00000558095 802 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AC087481.2-201ENST00000565492 330 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 CKS1BP3-201ENST00000600888 237 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 OR1S1-201ENST00000624470 978 ntBASIC3.57□□□□□ -1.84
ZNF560Q96MR9 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.57□□□□□ -1.84
ZNF560Q96MR9 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 ZNF826P-207ENST00000622273 1910 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 LINC02337-201ENST00000401043 374 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AL355143.1-201ENST00000407101 841 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 RPL23AP47-201ENST00000408017 460 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 GTF2IP3-201ENST00000433887 494 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AL662791.1-201ENST00000441992 928 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AC112492.1-201ENST00000449607 712 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AC104982.1-201ENST00000478775 574 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 HMGB3P15-201ENST00000507326 574 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 PCBP2P3-201ENST00000509726 843 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 MTCO2P32-201ENST00000514865 403 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AL390838.2-201ENST00000602394 274 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 RPL23AP92-201ENST00000603609 255 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AL365503.1-201ENST00000605247 905 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AC069545.1-201ENST00000605671 358 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AF129408.1-201ENST00000608767 431 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 AC009237.15-201ENST00000610252 501 ntBASIC3.56□□□□□ -1.84
ZNF560Q96MR9 RMST_8.1-201ENST00000610287 165 ntBASIC3.56□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms