Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 OR4C10P-201ENST00000434991 931 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 RPS3AP54-201ENST00000435535 734 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC004938.1-201ENST00000438468 308 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 PGBD4P3-201ENST00000440731 581 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 BRK1P2-201ENST00000442875 223 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 NDUFS5P3-201ENST00000450668 321 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC116533.1-201ENST00000459748 321 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 RPS20P20-201ENST00000460498 340 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 DYNLL1P6-201ENST00000503440 264 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC021146.2-201ENST00000504736 556 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 RNU6-1046P-201ENST00000516538 107 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 RNU6-264P-201ENST00000517134 104 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AP003122.4-201ENST00000530980 758 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AL512310.1-201ENST00000548639 172 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC037471.2-201ENST00000564941 598 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 MIR5697-201ENST00000578045 78 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC006116.10-201ENST00000591836 581 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC011503.1-202ENST00000598914 919 ntTSL 2 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC136443.5-201ENST00000603741 370 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC010680.4-201ENST00000605334 543 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC020634.1-201ENST00000608701 549 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 7SK.10-201ENST00000621414 298 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC005858.4-201ENST00000623191 700 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 CR392039.4-201ENST00000624968 501 ntBASIC4.65□□□□□ -1.67
CHFRQ96EP1 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 CASP1-217ENST00000640184 327 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHFRQ96EP1 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHFRQ96EP1 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
CHFRQ96EP1 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 UBE2W-207ENST00000602593 2201 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
CHFRQ96EP1 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC4.65□□□□□ -1.67
CHFRQ96EP1 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHFRQ96EP1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHFRQ96EP1 ADAM29-214ENST00000618444 2949 ntAPPRIS P1 TSL 4 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 AP001273.1-201ENST00000624493 3152 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 AC100871.1-201ENST00000507871 1456 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHFRQ96EP1 USP9YP4-201ENST00000424401 1745 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 AP000542.2-201ENST00000623199 6179 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 CUL2-209ENST00000537177 4271 ntTSL 5 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 RDH10-AS1-201ENST00000514599 3261 ntTSL 2 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.64□□□□□ -1.67
CHFRQ96EP1 Y_RNA.1-201ENST00000352915 104 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
CHFRQ96EP1 RNA5SP388-201ENST00000362584 119 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 Y_RNA.97-201ENST00000363094 102 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 RNU6-1085P-201ENST00000363576 107 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 Y_RNA.166-201ENST00000363730 102 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 SNORA62.2-201ENST00000364672 152 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 U3.15-201ENST00000365398 212 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 RNU6-1103P-201ENST00000384150 107 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 RNU6-908P-201ENST00000410160 94 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 RPS3AP3-201ENST00000411933 242 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 AC109780.2-201ENST00000413467 845 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 BX295541.1-201ENST00000417774 250 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 RPL30P3-201ENST00000424262 333 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 AC011998.1-201ENST00000433403 117 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 PHBP16-201ENST00000446318 950 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 RPL23AP43-201ENST00000446445 471 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 GAPDHP17-201ENST00000449858 1001 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 ISCUP1-201ENST00000454451 448 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 RPL7P19-201ENST00000469948 618 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 AC114981.1-201ENST00000503897 678 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 AF131216.2-201ENST00000512316 564 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 MRPL49P2-201ENST00000521066 465 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 CYCSP40-201ENST00000575927 294 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 MIR548Y-201ENST00000582739 110 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC4.64□□□□□ -1.67
CHFRQ96EP1 RMST_3.1-201ENST00000611651 109 ntBASIC4.64□□□□□ -1.67
CHFRQ96EP1 AL132822.1-201ENST00000617063 513 ntBASIC4.64□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms