Protein–RNA interactions for Protein: Q96DB2

HDAC11, Histone deacetylase 11, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11Q96DB2 RPS7P15-201ENST00000415804 584 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 NDUFB1P1-201ENST00000435191 180 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 MTCO2P20-201ENST00000437339 673 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 SKP1P1-201ENST00000438081 489 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 MTND4P6-201ENST00000438297 472 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 snoU109.4-201ENST00000458953 143 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 SNORD11.1-201ENST00000459482 85 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 SNRPGP3-201ENST00000469405 227 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AC108729.1-201ENST00000487812 947 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AC010587.2-201ENST00000511727 448 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 RN7SKP244-201ENST00000516513 307 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 DUXAP2-201ENST00000519198 589 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AC008011.1-201ENST00000545989 227 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AL161756.2-201ENST00000604597 246 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AC055876.5-201ENST00000605667 259 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AC069200.1-201ENST00000609511 323 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AC004009.2-201ENST00000623016 728 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AC231657.1-201ENST00000624313 397 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 AL390862.1-201ENST00000635467 1469 ntBASIC3.78□□□□□ -1.8
HDAC11Q96DB2 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.78□□□□□ -1.8
HDAC11Q96DB2 CR381670.1-201ENST00000624291 1693 ntBASIC3.78□□□□□ -1.81
HDAC11Q96DB2 AF127577.6-201ENST00000623352 2191 ntBASIC3.78□□□□□ -1.81
HDAC11Q96DB2 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 SNORD51-201ENST00000384320 80 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 RPL23AP29-201ENST00000397284 453 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AL590704.1-201ENST00000402856 794 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 MTCO3P12-201ENST00000416718 547 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC127526.1-201ENST00000417526 366 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC019178.2-201ENST00000423595 505 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 ARF4P2-201ENST00000430209 526 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC021146.8-201ENST00000507455 733 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC007991.1-201ENST00000522680 631 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 HSPA8P13-201ENST00000523715 472 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 MTCO2P15-201ENST00000532655 656 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 ZNF192P1-203ENST00000565888 810 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC099489.2-201ENST00000574976 260 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC012669.1-201ENST00000603209 283 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC006270.3-201ENST00000605967 1036 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC080013.4-201ENST00000607624 649 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC092106.3-201ENST00000611308 722 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC005858.4-201ENST00000623191 700 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AP000776.1-201ENST00000530032 1663 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AC004925.1-201ENST00000624256 2706 ntBASIC3.77□□□□□ -1.81
HDAC11Q96DB2 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.77□□□□□ -1.81
HDAC11Q96DB2 AL049780.3-201ENST00000624612 1583 ntBASIC3.76□□□□□ -1.81
HDAC11Q96DB2 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.76□□□□□ -1.81
HDAC11Q96DB2 ZNF876P-202ENST00000398732 1485 ntBASIC3.76□□□□□ -1.81
HDAC11Q96DB2 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
HDAC11Q96DB2 MIR1284-201ENST00000408337 120 ntBASIC3.76□□□□□ -1.81
HDAC11Q96DB2 SNORA57.3-201ENST00000411095 141 ntBASIC3.76□□□□□ -1.81
HDAC11Q96DB2 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC11Q96DB2 AL589946.1-201ENST00000421465 420 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC11Q96DB2 AC069157.1-201ENST00000421749 137 ntBASIC3.76□□□□□ -1.81
HDAC11Q96DB2 RPL21P66-201ENST00000426566 466 ntBASIC3.76□□□□□ -1.81
HDAC11Q96DB2 RPS25P9-201ENST00000435591 252 ntBASIC3.76□□□□□ -1.81
HDAC11Q96DB2 MTND3P1-201ENST00000441336 220 ntBASIC3.76□□□□□ -1.81
HDAC11Q96DB2 RPS24P6-201ENST00000452670 400 ntBASIC3.76□□□□□ -1.81
HDAC11Q96DB2 SUMO2P2-201ENST00000456482 255 ntBASIC3.76□□□□□ -1.81
HDAC11Q96DB2 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC11Q96DB2 RPL7P18-201ENST00000478965 734 ntBASIC3.76□□□□□ -1.81
HDAC11Q96DB2 CCDC39-AS1-201ENST00000495357 283 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC11Q96DB2 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC11Q96DB2 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC3.76□□□□□ -1.81
HDAC11Q96DB2 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.76□□□□□ -1.81
HDAC11Q96DB2 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC3.76□□□□□ -1.81
HDAC11Q96DB2 AC006499.2-201ENST00000513470 337 ntBASIC3.76□□□□□ -1.81
HDAC11Q96DB2 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms