Protein–RNA interactions for Protein: Q96AY4

TTC28, Tetratricopeptide repeat protein 28, humanhuman

Predictions only

Length 2,481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28Q96AY4 MIR6766-201ENST00000622641 72 ntBASIC2.22□□□□□ -2.05
TTC28Q96AY4 AL445437.1-201ENST00000623157 3087 ntBASIC2.22□□□□□ -2.05
TTC28Q96AY4 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC2.21□□□□□ -2.05
TTC28Q96AY4 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.21□□□□□ -2.06
TTC28Q96AY4 AC016717.2-201ENST00000609089 5141 ntBASIC2.21□□□□□ -2.06
TTC28Q96AY4 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC2.21□□□□□ -2.06
TTC28Q96AY4 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.21□□□□□ -2.06
TTC28Q96AY4 AL512633.1-201ENST00000399931 655 ntBASIC2.21□□□□□ -2.06
TTC28Q96AY4 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC2.21□□□□□ -2.06
TTC28Q96AY4 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC2.21□□□□□ -2.06
TTC28Q96AY4 OR52A4P-203ENST00000498233 1014 ntBASIC2.21□□□□□ -2.06
TTC28Q96AY4 XKRY-201ENST00000510392 1100 ntBASIC2.21□□□□□ -2.06
TTC28Q96AY4 RNA5SP102-201ENST00000516865 106 ntBASIC2.21□□□□□ -2.06
TTC28Q96AY4 AC068657.1-201ENST00000520807 306 ntBASIC2.21□□□□□ -2.06
TTC28Q96AY4 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.21□□□□□ -2.06
TTC28Q96AY4 WDR61-205ENST00000558459 884 ntTSL 3 BASIC2.21□□□□□ -2.06
TTC28Q96AY4 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.21□□□□□ -2.06
TTC28Q96AY4 AC097717.1-211ENST00000600604 687 ntTSL 5 BASIC2.21□□□□□ -2.06
TTC28Q96AY4 AC233280.2-201ENST00000603917 1070 ntBASIC2.21□□□□□ -2.06
TTC28Q96AY4 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
TTC28Q96AY4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC2.21□□□□□ -2.06
TTC28Q96AY4 Y_RNA.327-201ENST00000365201 102 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.2□□□□□ -2.06
TTC28Q96AY4 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.2□□□□□ -2.06
TTC28Q96AY4 AP004217.1-201ENST00000480579 346 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC2.2□□□□□ -2.06
TTC28Q96AY4 RNU6ATAC39P-201ENST00000516309 149 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 AP005660.1-201ENST00000522972 293 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.2□□□□□ -2.06
TTC28Q96AY4 OR1AB1P-201ENST00000585564 761 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.2□□□□□ -2.06
TTC28Q96AY4 RNA5SP190-201ENST00000365222 118 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC2.2□□□□□ -2.06
TTC28Q96AY4 RN7SL75P-201ENST00000461926 281 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 AC008526.1-201ENST00000509149 338 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.2□□□□□ -2.06
TTC28Q96AY4 RN7SKP40-201ENST00000517211 242 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC2.2□□□□□ -2.06
TTC28Q96AY4 AC091834.1-201ENST00000614543 472 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 MIR7973-1-201ENST00000614683 76 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 PVT1_3.1-201ENST00000620853 95 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.2□□□□□ -2.06
TTC28Q96AY4 CDC27P2-201ENST00000425026 1922 ntBASIC2.2□□□□□ -2.06
TTC28Q96AY4 Y_RNA.30-201ENST00000362572 97 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 ZNF603P-201ENST00000405613 487 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.19□□□□□ -2.06
TTC28Q96AY4 AC104170.2-201ENST00000424246 678 ntTSL 3 BASIC2.19□□□□□ -2.06
TTC28Q96AY4 AL590399.6-201ENST00000446396 307 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 MRPL50P4-201ENST00000446432 475 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 SNORD13-201ENST00000459299 104 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 AC011352.3-201ENST00000505162 593 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 SNORA9.3-201ENST00000516383 129 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.19□□□□□ -2.06
TTC28Q96AY4 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC2.19□□□□□ -2.06
TTC28Q96AY4 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.19□□□□□ -2.06
TTC28Q96AY4 RNA5SP456-201ENST00000364002 114 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 NPM1P38-201ENST00000403835 865 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 PPP1R2P5-201ENST00000457256 603 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 AC126182.1-201ENST00000478134 357 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.19□□□□□ -2.06
TTC28Q96AY4 AC245166.1-201ENST00000521012 253 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 MIR3683-201ENST00000580847 82 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 AC012360.2-201ENST00000609349 391 ntBASIC2.19□□□□□ -2.06
TTC28Q96AY4 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC2.19□□□□□ -2.06
TTC28Q96AY4 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
TTC28Q96AY4 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.18□□□□□ -2.06
TTC28Q96AY4 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC2.18□□□□□ -2.06
TTC28Q96AY4 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC2.18□□□□□ -2.06
TTC28Q96AY4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC2.18□□□□□ -2.06
TTC28Q96AY4 HSPE1P28-201ENST00000443139 211 ntBASIC2.18□□□□□ -2.06
TTC28Q96AY4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.18□□□□□ -2.06
TTC28Q96AY4 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC2.18□□□□□ -2.06
TTC28Q96AY4 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC2.18□□□□□ -2.06
TTC28Q96AY4 OR4A45P-201ENST00000529954 901 ntBASIC2.18□□□□□ -2.06
TTC28Q96AY4 AC068205.1-204ENST00000532989 481 ntTSL 3 BASIC2.18□□□□□ -2.06
TTC28Q96AY4 AC025260.1-201ENST00000548858 430 ntBASIC2.18□□□□□ -2.06
TTC28Q96AY4 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC2.18□□□□□ -2.06
TTC28Q96AY4 AL451074.6-201ENST00000608512 729 ntBASIC2.18□□□□□ -2.06
TTC28Q96AY4 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.18□□□□□ -2.06
TTC28Q96AY4 RNA5SP210-201ENST00000391034 120 ntBASIC2.18□□□□□ -2.06
TTC28Q96AY4 AL139156.1-201ENST00000412785 841 ntBASIC2.18□□□□□ -2.06
TTC28Q96AY4 EI24P1-201ENST00000416584 867 ntBASIC2.18□□□□□ -2.06
TTC28Q96AY4 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC2.18□□□□□ -2.06
TTC28Q96AY4 COX6CP2-201ENST00000444980 225 ntBASIC2.18□□□□□ -2.06
TTC28Q96AY4 RNA5SP182-201ENST00000516064 82 ntBASIC2.18□□□□□ -2.06
TTC28Q96AY4 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
TTC28Q96AY4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.18□□□□□ -2.06
TTC28Q96AY4 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TTC28Q96AY4 SETP15-201ENST00000412724 337 ntBASIC2.17□□□□□ -2.06
TTC28Q96AY4 MTCYBP31-201ENST00000438855 1122 ntBASIC2.17□□□□□ -2.06
TTC28Q96AY4 MTND3P6-201ENST00000485242 339 ntBASIC2.17□□□□□ -2.06
TTC28Q96AY4 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.17□□□□□ -2.06
TTC28Q96AY4 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC2.17□□□□□ -2.06
TTC28Q96AY4 AC131238.1-201ENST00000617135 328 ntBASIC2.17□□□□□ -2.06
TTC28Q96AY4 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TTC28Q96AY4 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
TTC28Q96AY4 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC2.17□□□□□ -2.06
TTC28Q96AY4 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
TTC28Q96AY4 MIR9-3-201ENST00000385084 90 ntBASIC2.17□□□□□ -2.06
TTC28Q96AY4 AC013404.1-201ENST00000413068 249 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 99.2 ms