Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 SNORA40.3-201ENST00000390964 122 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 SNORD115.1-201ENST00000391109 76 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 RPL7P25-201ENST00000404151 721 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AL138880.1-201ENST00000405824 642 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 USP9YP13-201ENST00000417797 480 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 OR1AA1P-201ENST00000419597 916 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 RPL23AP1-201ENST00000428990 471 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AC092641.1-201ENST00000440229 772 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 RPS17P13-201ENST00000448974 407 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 MTND1P27-201ENST00000451117 902 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AC099563.1-201ENST00000456086 418 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 TPTE2P5-203ENST00000458118 728 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AP000873.1-201ENST00000463987 400 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AP000926.1-201ENST00000479573 241 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 RPL23AP41-201ENST00000484754 458 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 ARL2BPP4-201ENST00000506854 471 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 Y_RNA.655-201ENST00000515919 96 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 SNORA31.20-201ENST00000517111 133 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AC103783.1-201ENST00000520506 373 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AC084083.1-201ENST00000526947 722 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AP000907.2-201ENST00000530827 353 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AL352979.3-201ENST00000553515 247 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 OR4K8P-201ENST00000578842 1048 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 MIR4284-201ENST00000578924 81 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 MIR5096-201ENST00000583713 70 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AL160290.3-201ENST00000604869 165 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AP005019.3-201ENST00000620418 560 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AC008785.1-201ENST00000624475 456 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AL603839.4-201ENST00000624658 1005 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AC138649.5-201ENST00000637456 137 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 AL157700.1-201ENST00000561973 1432 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 TEX21P-201ENST00000447107 1476 ntBASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 APAF1-208ENST00000549007 3492 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
RAB40AQ8WXH6 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 OR56B2P-202ENST00000641377 2453 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 OSBPL6-201ENST00000190611 10513 ntAPPRIS P3 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 MIR129-1-201ENST00000384972 72 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 RNU6ATAC5P-201ENST00000388104 126 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 FCF1P10-201ENST00000407590 479 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC078974.1-201ENST00000411597 223 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 FTH1P6-201ENST00000430768 320 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AL121871.1-201ENST00000443413 436 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AL033528.1-201ENST00000453780 140 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 RPL5P32-201ENST00000454085 879 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC016751.1-201ENST00000458254 306 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 snoU109.1-201ENST00000459339 135 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 OR9M1P-201ENST00000459641 921 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 BTBD11-206ENST00000494235 811 ntTSL 2 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC078918.1-201ENST00000498515 228 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC108210.1-201ENST00000510772 825 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC079140.3-201ENST00000511111 550 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 NPM1P41-201ENST00000512920 831 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 RNU6-201P-201ENST00000517100 61 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 MED28P5-201ENST00000528254 438 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AP001781.1-201ENST00000530977 207 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC105129.1-201ENST00000560250 297 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC087481.2-201ENST00000565492 330 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC012182.1-201ENST00000570133 895 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 MIR4715-201ENST00000584117 79 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AL158211.4-201ENST00000606988 584 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC103591.3-201ENST00000608684 209 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 MIR6798-201ENST00000612887 67 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC008250.2-201ENST00000615261 205 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 AC016588.2-201ENST00000632484 3021 ntBASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
RAB40AQ8WXH6 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC3.82□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 93 ms