Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 DCAF13P1-201ENST00000495256 1330 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 RNU6-433P-201ENST00000363216 104 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 RNU6-730P-201ENST00000383954 104 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AL021407.1-201ENST00000404531 386 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 RNU6-920P-201ENST00000410926 92 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AC083875.1-201ENST00000419509 405 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 OR51AB1P-201ENST00000429046 620 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 PSMA2P3-201ENST00000429685 675 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AC006480.1-201ENST00000449887 378 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 OR6C5P-201ENST00000452388 923 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 CEACAMP4-201ENST00000457676 421 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 RPL31P3-201ENST00000458430 332 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 SNORD108-201ENST00000459332 71 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 MIR2116-201ENST00000517221 80 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AC106038.2-201ENST00000520706 568 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 MTCO1P49-201ENST00000523429 802 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AC135279.1-201ENST00000543493 504 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 MIR5186-201ENST00000577504 120 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 MIR4738-201ENST00000579134 87 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 NBR2-204ENST00000587322 63 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AC005255.1-201ENST00000593748 216 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AL031985.2-201ENST00000600955 480 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 VN1R85P-201ENST00000601587 426 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 U7.8-201ENST00000619968 63 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 AC004777.1-201ENST00000624317 287 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 TNFAIP8-203ENST00000415806 1990 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 PABPC1P7-201ENST00000413177 1513 ntBASIC3.79□□□□□ -1.8
SLC44A1Q8WWI5 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 RGPD4-201ENST00000408999 5464 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 SPRR2C-201ENST00000290702 219 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 RPL23AP57-201ENST00000332361 466 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 MIR372-201ENST00000362225 67 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 Y_RNA.560-201ENST00000384689 102 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 SNORA57.1-201ENST00000391227 145 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC127526.1-201ENST00000417526 366 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 SEPT2P1-201ENST00000419651 180 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC098826.1-201ENST00000433943 471 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 NDUFB1P1-201ENST00000435191 180 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 EEF1E1P1-201ENST00000446998 430 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 RNU7-136P-201ENST00000458819 69 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC092754.2-201ENST00000463506 460 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC109486.1-201ENST00000486833 374 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC090453.1-201ENST00000495560 436 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 MTCYBP43-201ENST00000513621 740 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC006960.3-201ENST00000561845 705 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC090371.2-203ENST00000578782 473 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AP005136.1-201ENST00000579765 429 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 MAGOH2P-202ENST00000584384 429 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 IGKV1OR2-118-201ENST00000603238 347 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 YWHAQP7-201ENST00000603536 658 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AL049634.3-201ENST00000604968 457 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 MIR6867-201ENST00000610636 67 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC024941.1-201ENST00000612250 334 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC112484.5-201ENST00000624189 228 ntBASIC3.78□□□□□ -1.8
SLC44A1Q8WWI5 AC007494.3-201ENST00000624660 743 ntBASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms