Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 NME5-201ENST00000265191 1198 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 SNORA62.2-201ENST00000364672 152 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 RNU1-100P-201ENST00000365255 165 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 RPS4XP7-201ENST00000406274 780 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 PTGES3P2-201ENST00000407942 482 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 AL445183.3-201ENST00000414168 502 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 SEC63P1-201ENST00000425785 1258 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 AL691517.1-201ENST00000440833 1235 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 RPL21P99-201ENST00000480369 423 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 AC107398.1-201ENST00000486904 505 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 CKS1BP7-201ENST00000522230 235 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 AC079148.1-201ENST00000565944 819 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 CBX3P2-202ENST00000583365 535 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 MTCO2P22-201ENST00000603246 681 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 AC002076.2-201ENST00000617362 122 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 AC025034.2-201ENST00000623264 286 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 HDX-206ENST00000506585 6158 ntTSL 2 BASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 TAB3P1-202ENST00000452645 1634 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 AL592437.2-201ENST00000421655 2434 ntBASIC2.64□□□□□ -1.99
SHROOM3Q8TF72 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 Y_RNA.4-201ENST00000362333 112 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AL135786.1-201ENST00000415892 214 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 SAR1AP4-201ENST00000429225 591 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 MUPP-201ENST00000438111 566 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 HMGB3P12-201ENST00000438745 556 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 GSTA11P-201ENST00000452866 669 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC010265.1-201ENST00000513509 211 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC096725.1-201ENST00000514266 313 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC023158.1-201ENST00000561632 1025 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC138915.3-201ENST00000562908 1389 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC098483.2-201ENST00000603158 454 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC007423.1-201ENST00000605009 627 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC010872.1-201ENST00000624225 675 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC092326.2-201ENST00000624772 1561 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AL021368.2-201ENST00000606125 5352 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 MT-TP-201ENST00000387461 68 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 EIF5P1-201ENST00000400019 1231 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AL079342.1-201ENST00000401460 267 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 FAM103A2P-201ENST00000444122 354 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC243772.1-201ENST00000451620 410 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AP000926.1-201ENST00000479573 241 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 MTND3P24-201ENST00000506306 329 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC098868.1-201ENST00000512628 624 ntTSL 2 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 SNORA31.13-201ENST00000516624 135 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AP001207.1-201ENST00000524051 481 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 MIR4506-201ENST00000584693 77 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC004775.1-201ENST00000607389 753 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 MIR6817-201ENST00000615588 66 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AL445493.3-201ENST00000619568 477 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 CRYM-AS1-204ENST00000637983 556 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 MBNL1-224ENST00000545754 5147 ntTSL 5 BASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 AC016717.2-201ENST00000609089 5141 ntBASIC2.63□□□□□ -1.99
SHROOM3Q8TF72 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 RNU6-482P-201ENST00000391068 107 ntBASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC009302.1-201ENST00000417147 390 ntBASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC007000.2-201ENST00000442564 487 ntBASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AL353898.1-201ENST00000444055 238 ntBASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC023512.1-201ENST00000444513 499 ntBASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.62□□□□□ -1.99
SHROOM3Q8TF72 WASF1P1-201ENST00000447560 1131 ntBASIC2.62□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 85.7 ms