Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 RNU6-619P-201ENST00000365146 108 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 ANAPC10P1-201ENST00000395991 556 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AL136310.1-201ENST00000404926 654 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AL136133.1-201ENST00000413694 376 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AL356320.2-201ENST00000417263 507 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 MTCO1P3-201ENST00000429327 192 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 RPL23AP22-201ENST00000437556 453 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 CYCSP32-201ENST00000440548 321 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 ELOCP13-201ENST00000443934 329 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AL591719.1-201ENST00000444669 744 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 NF1P3-201ENST00000457709 450 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC126121.1-201ENST00000482313 553 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC048346.1-201ENST00000510247 144 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 Vault.1-201ENST00000516474 102 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 EEF1A1P37-201ENST00000522748 715 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 VN1R79P-201ENST00000593540 513 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC022146.1-201ENST00000595307 847 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC234772.3-201ENST00000602277 528 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AL035411.2-201ENST00000604022 421 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC113194.1-201ENST00000606037 500 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC092106.3-201ENST00000611308 722 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AC140725.3-201ENST00000616193 880 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 ATP5A1P2-202ENST00000616464 443 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 MFSD8-245ENST00000641743 948 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AL353743.1-202ENST00000431724 1695 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 AP005901.5-201ENST00000545779 1796 ntBASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.94□□□□□ -1.94
LINC01555Q8NAE3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 ZNF833P-201ENST00000424938 1494 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 RNU6-582P-201ENST00000362989 107 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 U3.6-201ENST00000363622 211 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 Y_RNA.408-201ENST00000383987 102 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 RNU6-1151P-201ENST00000384684 107 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 MIR128-1-201ENST00000384921 82 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 SNORA48.2-201ENST00000390926 124 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 SNORA48.5-201ENST00000391143 135 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AC008280.1-201ENST00000418851 412 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 RPL7P53-201ENST00000421245 739 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AL513175.2-201ENST00000422071 443 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 RPP40P1-201ENST00000426762 456 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 SEPT7P5-201ENST00000434048 306 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 FGF7P5-201ENST00000441829 291 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 RPL23AP76-201ENST00000441860 458 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 RPL37P6-202ENST00000464216 403 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 RPL27AP5-201ENST00000469428 449 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AC117440.1-201ENST00000474107 571 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 GAPDHP39-201ENST00000481866 979 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 RPL23AP44-201ENST00000482216 473 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AC005351.1-201ENST00000511152 786 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 Y_RNA.717-201ENST00000517106 92 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 RN7SKP234-201ENST00000517173 224 ntBASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC2.93□□□□□ -1.94
LINC01555Q8NAE3 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 132.8 ms