Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 AL096829.2-201ENST00000446582 742 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 RN7SL633P-201ENST00000488974 297 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 KLRA1P-201ENST00000503499 986 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 RNA5SP148-201ENST00000516527 94 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 AP000916.1-201ENST00000533869 835 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 AC068339.2-201ENST00000534395 618 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 AC011611.5-201ENST00000552477 578 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 NIFKP8-201ENST00000560500 874 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 AL139022.2-201ENST00000606934 443 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 AC018754.1-201ENST00000607486 925 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 AC008121.2-201ENST00000614647 523 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 CR381572.1-201ENST00000625098 102 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 FAM157B-203ENST00000639350 358 ntBASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
COL27A1Q8IZC6 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.59□□□□□ -2
COL27A1Q8IZC6 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.59□□□□□ -2
COL27A1Q8IZC6 HSP90AA5P-201ENST00000438353 2192 ntBASIC2.59□□□□□ -2
COL27A1Q8IZC6 ANKRD28-215ENST00000624145 6383 ntTSL 2 BASIC2.59□□□□□ -2
COL27A1Q8IZC6 ZNF826P-207ENST00000622273 1910 ntBASIC2.59□□□□□ -2
COL27A1Q8IZC6 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC2.58□□□□□ -2
COL27A1Q8IZC6 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.58□□□□□ -2
COL27A1Q8IZC6 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
COL27A1Q8IZC6 RNU6-207P-201ENST00000384137 107 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 RNU6-1151P-201ENST00000384684 107 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC2.58□□□□□ -2
COL27A1Q8IZC6 AL133384.1-201ENST00000412744 351 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC245054.2-201ENST00000415639 319 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC241520.1-201ENST00000422654 1099 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 ELOCP6-201ENST00000429066 328 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 GXYLT1P1-201ENST00000446657 490 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 MRPL42P4-201ENST00000453267 443 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 HMGN3P1-201ENST00000453847 193 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 CDC42P1-201ENST00000456658 548 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 ELOCP12-201ENST00000458706 328 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 TRBV12-1-201ENST00000479785 344 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.58□□□□□ -2
COL27A1Q8IZC6 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC048346.1-201ENST00000510247 144 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 C1GALT1P2-201ENST00000510813 1104 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 RNU4-60P-201ENST00000517239 135 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC087894.1-201ENST00000538359 518 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 CENPUP2-201ENST00000555897 1186 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 BNIP3P4-201ENST00000604946 565 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC087241.4-201ENST00000612441 480 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC006213.4-201ENST00000616184 634 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 FRG1HP-204ENST00000617940 757 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AL121594.5-201ENST00000631724 573 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 TAB3P1-202ENST00000452645 1634 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AL136964.1-201ENST00000622038 2990 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 ZNF658B-202ENST00000615961 3375 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 MIR153-1-201ENST00000384914 90 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AL583834.1-201ENST00000406943 343 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 PRELID3BP11-201ENST00000414230 479 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 USP9YP21-201ENST00000420603 432 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC096632.1-201ENST00000427395 310 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC112220.1-201ENST00000434628 355 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 Z77249.1-201ENST00000444622 1175 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 EXTL2P1-201ENST00000446218 416 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 MTND1P33-201ENST00000446251 917 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.58□□□□□ -2
COL27A1Q8IZC6 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC093801.2-201ENST00000503966 1050 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.58□□□□□ -2
COL27A1Q8IZC6 YWHAEP4-201ENST00000505390 198 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.58□□□□□ -2
COL27A1Q8IZC6 PRELID3BP4-201ENST00000515476 571 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AF279873.4-202ENST00000521714 511 ntTSL 2 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.58□□□□□ -2
COL27A1Q8IZC6 RFPL1S-203ENST00000539579 330 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 AC074029.1-201ENST00000552531 1044 ntBASIC2.58□□□□□ -2
COL27A1Q8IZC6 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC2.58□□□□□ -2
COL27A1Q8IZC6 VN1R88P-201ENST00000596787 292 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms