Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 KLHL2P1-201ENST00000508691 521 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC008885.1-201ENST00000514930 301 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 IGKV2D-36-201ENST00000518643 226 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 SETP2-201ENST00000553886 926 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 CFL2-206ENST00000556161 546 ntTSL 4 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 BDH2P1-201ENST00000602288 736 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AP002906.1-201ENST00000603405 233 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC124312.4-201ENST00000605533 310 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 HSPE1P14-201ENST00000605812 302 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC007318.2-201ENST00000620999 243 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 AC139713.2-210ENST00000641741 992 ntBASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.34□□□□□ -1.87
CCDC65Q8IXS2 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC65Q8IXS2 MTND5P31-201ENST00000419366 1374 ntBASIC3.34□□□□□ -1.88
CCDC65Q8IXS2 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
CCDC65Q8IXS2 NOX4-202ENST00000343727 3347 ntTSL 2 BASIC3.34□□□□□ -1.88
CCDC65Q8IXS2 PABPC1P7-201ENST00000413177 1513 ntBASIC3.34□□□□□ -1.88
CCDC65Q8IXS2 SNORA71.1-201ENST00000364523 117 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 RNU6-207P-201ENST00000384137 107 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 RNU6-441P-201ENST00000384545 106 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 RN7SKP58-201ENST00000411010 305 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 DPYD-AS2-201ENST00000422259 788 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AC104978.1-201ENST00000449387 391 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AC104115.2-201ENST00000523026 687 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 PSMA2P1-201ENST00000526365 646 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 OR4R2P-201ENST00000530815 597 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 NIFKP8-201ENST00000560500 874 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 OR4G1P-201ENST00000588632 938 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AC073387.2-201ENST00000604797 784 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AL158211.2-201ENST00000607282 395 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AC131902.3-201ENST00000611767 581 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AC093831.2-201ENST00000624393 3427 ntBASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AL445259.1-201ENST00000587106 2984 ntTSL 5 BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 FGF14-201ENST00000376131 12882 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
CCDC65Q8IXS2 AL035425.3-201ENST00000564206 4996 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 RNU6-444P-201ENST00000383988 108 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 MIR16-1-201ENST00000385271 89 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AL139281.1-201ENST00000422120 335 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AL451062.2-201ENST00000427515 271 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AL512649.1-201ENST00000428997 581 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 NAP1L1P3-201ENST00000462291 880 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AC117440.1-201ENST00000474107 571 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 OR2A20P-203ENST00000498397 1268 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 RNU6-467P-201ENST00000517027 110 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AP000790.1-201ENST00000528891 737 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 BPTFP1-201ENST00000579209 492 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 SNORD84-203ENST00000584275 78 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AC007179.3-201ENST00000604976 235 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AC091046.2-201ENST00000620775 665 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AL590396.4-201ENST00000636779 956 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 BX649567.1-201ENST00000642071 1134 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 SGO1P1-201ENST00000603525 1447 ntBASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.32□□□□□ -1.88
CCDC65Q8IXS2 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.8 ms