Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 SCAPER-207ENST00000563290 5028 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 U8.4-201ENST00000363626 134 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 Y_RNA.404-201ENST00000383978 102 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 SNORA16.2-201ENST00000390991 127 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AL583834.1-201ENST00000406943 343 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 SNORA11-201ENST00000408789 128 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 UBE2FP1-201ENST00000416536 447 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AL445928.1-201ENST00000435545 222 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AZGP1P2-201ENST00000454506 345 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 ACA64.4-201ENST00000459070 127 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 RNU7-167P-201ENST00000459160 62 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AC104472.2-201ENST00000469035 601 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 SNRPCP3-201ENST00000474888 476 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AC010350.1-201ENST00000504908 231 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AC093815.1-201ENST00000508637 280 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 RN7SKP67-201ENST00000515905 235 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 SNORA14.1-201ENST00000516113 141 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 Y_RNA.670-201ENST00000516255 105 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 RNU6-1069P-201ENST00000516612 133 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 RNU1-54P-201ENST00000517181 120 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 GSTP1P1-201ENST00000548078 319 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 MIR4646-201ENST00000580775 63 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AL670379.4-201ENST00000605279 254 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 SNHG22-203ENST00000617833 660 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AL589994.2-201ENST00000621124 579 ntBASIC6.09□□□□□ -1.43
RNF135Q8IUD6 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 PCA3-201ENST00000412654 3922 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
RNF135Q8IUD6 CDC27P3-201ENST00000635418 1910 ntBASIC6.09□□□□□ -1.44
RNF135Q8IUD6 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.09□□□□□ -1.44
RNF135Q8IUD6 LYRM2-208ENST00000523377 5353 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.44
RNF135Q8IUD6 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.09□□□□□ -1.44
RNF135Q8IUD6 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.44
RNF135Q8IUD6 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
RNF135Q8IUD6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC6.09□□□□□ -1.44
RNF135Q8IUD6 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AC116667.1-201ENST00000604855 2072 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 OR2T29-202ENST00000641069 2637 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 RNA5SP319-201ENST00000362768 119 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 RNU6-490P-201ENST00000362985 107 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 RNA5-8SP7-201ENST00000363443 155 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 Y_RNA.496-201ENST00000384444 101 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 RPL23AP17-201ENST00000401064 499 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 MTCO2P33-201ENST00000402100 465 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 NDUFS5P1-201ENST00000405668 289 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 Y_RNA.594-201ENST00000410373 140 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 LINC01203-201ENST00000419566 580 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 EIF4A1P7-201ENST00000421800 1220 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 SRSF1P1-201ENST00000424058 520 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 RSL24D1P6-201ENST00000426934 401 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 BX276092.4-201ENST00000452056 248 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 RPL12P20-201ENST00000475538 479 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 RN7SL222P-201ENST00000476452 299 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 RPS21P4-201ENST00000487122 248 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 PGAM1P13-201ENST00000507497 754 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AC006296.2-201ENST00000507932 764 ntTSL 3 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AC005798.1-201ENST00000513715 387 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 RRM2B-207ENST00000519962 201 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AC145423.1-201ENST00000605712 336 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AC006329.2-201ENST00000611491 394 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 SDAD1-203ENST00000395711 2513 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 E2F5-208ENST00000521429 1551 ntTSL 5 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AC109811.1-201ENST00000512833 2807 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 AC007529.1-201ENST00000418574 2178 ntBASIC6.08□□□□□ -1.44
RNF135Q8IUD6 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC6.08□□□□□ -1.44
RNF135Q8IUD6 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 107.3 ms