Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB1Q86U70 AC002381.1-201ENST00000447049 280 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 RPL7P52-201ENST00000449200 742 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 HMGB1P15-201ENST00000453854 435 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 DNAJC19P1-201ENST00000455312 319 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 SNRPGP5-201ENST00000456003 220 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 ST13P14-201ENST00000474095 734 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
LDB1Q86U70 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB1Q86U70 AL139099.1-201ENST00000497398 403 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 AC068305.1-201ENST00000497406 726 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.71□□□□□ -1.82
LDB1Q86U70 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.71□□□□□ -1.82
LDB1Q86U70 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.71□□□□□ -1.82
LDB1Q86U70 AC023141.12-201ENST00000512399 199 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 MRPS33P3-201ENST00000513456 322 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 RN7SKP83-201ENST00000516512 178 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 RNU6-678P-201ENST00000516832 109 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC3.71□□□□□ -1.82
LDB1Q86U70 OR7K1P-201ENST00000546439 926 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 OR6C7P-201ENST00000547875 934 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 MRPS36P5-201ENST00000551909 298 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 AL121603.1-201ENST00000553815 142 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 BNIP3P5-201ENST00000562290 498 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.71□□□□□ -1.82
LDB1Q86U70 AP000811.1-201ENST00000603803 651 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB1Q86U70 AC018714.1-201ENST00000605028 208 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB1Q86U70 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LDB1Q86U70 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB1Q86U70 AL596245.1-201ENST00000618994 362 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB1Q86U70 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.71□□□□□ -1.82
LDB1Q86U70 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.71□□□□□ -1.82
LDB1Q86U70 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.71□□□□□ -1.82
LDB1Q86U70 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LDB1Q86U70 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.71□□□□□ -1.82
LDB1Q86U70 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB1Q86U70 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB1Q86U70 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB1Q86U70 EXOC5P1-201ENST00000510543 1969 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 MAPK10-373ENST00000641983 6772 ntBASIC3.71□□□□□ -1.82
LDB1Q86U70 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.71□□□□□ -1.82
LDB1Q86U70 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDB1Q86U70 SEC31A-215ENST00000505472 4159 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB1Q86U70 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB1Q86U70 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDB1Q86U70 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.7□□□□□ -1.82
LDB1Q86U70 XIAPP3-201ENST00000312918 795 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AC007685.1-201ENST00000329806 452 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.7□□□□□ -1.82
LDB1Q86U70 RNA5SP88-201ENST00000365560 109 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 RNU6-629P-201ENST00000384061 103 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 RNA5SP424-201ENST00000390988 115 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AL138880.1-201ENST00000405824 642 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 RNU6-712P-201ENST00000410558 100 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 RPS15AP38-201ENST00000413110 372 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AC092447.6-201ENST00000414578 210 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.7□□□□□ -1.82
LDB1Q86U70 RPS7P15-201ENST00000415804 584 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.7□□□□□ -1.82
LDB1Q86U70 LINC01857-201ENST00000429730 492 ntTSL 2 BASIC3.7□□□□□ -1.82
LDB1Q86U70 MTND4LP10-201ENST00000435146 291 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB1Q86U70 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.7□□□□□ -1.82
LDB1Q86U70 NPM1P49-201ENST00000448027 714 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 PAXBP1P1-201ENST00000449315 447 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB1Q86U70 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.7□□□□□ -1.82
LDB1Q86U70 AC005921.1-201ENST00000510589 286 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AC024589.1-201ENST00000512207 263 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 SNORA70.14-201ENST00000516205 110 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AC008802.1-201ENST00000519121 791 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AC007991.1-201ENST00000522680 631 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 MTCYBP41-201ENST00000528913 1123 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AC092851.1-201ENST00000535964 478 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.7□□□□□ -1.82
LDB1Q86U70 CYCSP30-201ENST00000546447 172 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 SETP7-201ENST00000552169 453 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AC008015.1-201ENST00000555505 465 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 HSPE1P5-201ENST00000561489 272 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AC012182.1-201ENST00000570133 895 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC3.7□□□□□ -1.82
LDB1Q86U70 AC090615.1-201ENST00000577519 154 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AC022916.3-201ENST00000592961 742 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 Z99129.2-201ENST00000619967 314 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 AL031667.3-201ENST00000620124 655 ntBASIC3.7□□□□□ -1.82
LDB1Q86U70 CCNYL2-203ENST00000638057 730 ntTSL 3 BASIC3.7□□□□□ -1.82
LDB1Q86U70 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB1Q86U70 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.7□□□□□ -1.82
LDB1Q86U70 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC3.7□□□□□ -1.82
LDB1Q86U70 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.7□□□□□ -1.82
LDB1Q86U70 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC3.7□□□□□ -1.82
LDB1Q86U70 CFAP44-202ENST00000393845 7069 ntAPPRIS ALT2 TSL 5 BASIC3.7□□□□□ -1.82
LDB1Q86U70 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.7□□□□□ -1.82
LDB1Q86U70 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.69□□□□□ -1.82
LDB1Q86U70 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LDB1Q86U70 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms