Protein–RNA interactions for Protein: Q7Z407

CSMD3, CUB and sushi domain-containing protein 3, humanhuman

Predictions only

Length 3,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3Q7Z407 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.56□□□□□ -2.16
CSMD3Q7Z407 RNU6-457P-201ENST00000363999 107 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 AC073136.2-201ENST00000417282 849 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC1.55□□□□□ -2.16
CSMD3Q7Z407 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
CSMD3Q7Z407 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
CSMD3Q7Z407 SCN1A-220ENST00000641603 12506 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 Y_RNA.122-201ENST00000363331 96 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 SNORA25.6-201ENST00000364121 118 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 MIR137-201ENST00000385223 102 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC1.55□□□□□ -2.16
CSMD3Q7Z407 AL159169.1-201ENST00000421119 127 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 AL162388.1-201ENST00000450912 352 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC1.55□□□□□ -2.16
CSMD3Q7Z407 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC1.55□□□□□ -2.16
CSMD3Q7Z407 BMS1P7-201ENST00000602440 1052 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 RMST_2.1-201ENST00000617263 136 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 AC092427.1-202ENST00000430569 476 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 CYP3A43-210ENST00000444905 733 ntTSL 5 BASIC1.55□□□□□ -2.16
CSMD3Q7Z407 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC1.55□□□□□ -2.16
CSMD3Q7Z407 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC1.55□□□□□ -2.16
CSMD3Q7Z407 AC012182.1-201ENST00000570133 895 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 VN1R80P-201ENST00000597126 338 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 AC010378.1-201ENST00000619270 362 ntBASIC1.55□□□□□ -2.16
CSMD3Q7Z407 USF3-202ENST00000478658 8461 ntAPPRIS P2 TSL 5 BASIC1.54□□□□□ -2.16
CSMD3Q7Z407 SNORA51.11-201ENST00000384442 131 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC1.54□□□□□ -2.16
CSMD3Q7Z407 RPS27P29-201ENST00000463110 252 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 RN7SL283P-201ENST00000489055 303 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 MEPE-206ENST00000511670 550 ntTSL 4 BASIC1.54□□□□□ -2.16
CSMD3Q7Z407 AL133271.1-201ENST00000538229 291 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 TMEM161BP1-201ENST00000457388 1457 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.54□□□□□ -2.16
CSMD3Q7Z407 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
CSMD3Q7Z407 UQCRFS1P3-201ENST00000407697 385 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 AC098826.1-201ENST00000433943 471 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 RPL23AP74-201ENST00000437246 471 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 AC068781.1-201ENST00000488231 618 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC1.54□□□□□ -2.16
CSMD3Q7Z407 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC1.54□□□□□ -2.16
CSMD3Q7Z407 MIR5002-201ENST00000584713 97 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 ST7-AS2-206ENST00000456577 1351 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
CSMD3Q7Z407 AF127577.6-201ENST00000623352 2191 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC1.54□□□□□ -2.16
CSMD3Q7Z407 AL109809.4-201ENST00000603520 2185 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 SNORA67.3-201ENST00000384366 140 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 RPS7P9-201ENST00000414704 586 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 USP9YP5-201ENST00000511770 630 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.54□□□□□ -2.16
CSMD3Q7Z407 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.54□□□□□ -2.16
CSMD3Q7Z407 LINC00216-201ENST00000623548 1126 ntBASIC1.54□□□□□ -2.16
CSMD3Q7Z407 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CSMD3Q7Z407 LUZP4P1-201ENST00000415420 344 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 AC106901.1-201ENST00000425086 698 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 RPL23AP45-201ENST00000476406 468 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 RNU6-1334P-201ENST00000516032 105 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 RPL23AP84-201ENST00000571193 464 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 FRG1DP-201ENST00000635586 771 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 AP001486.2-201ENST00000561652 5113 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CSMD3Q7Z407 LINC00560-201ENST00000564593 1599 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CSMD3Q7Z407 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
CSMD3Q7Z407 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
CSMD3Q7Z407 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC1.53□□□□□ -2.16
CSMD3Q7Z407 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC1.53□□□□□ -2.16
CSMD3Q7Z407 SNORA40.18-201ENST00000391200 128 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 AC135999.1-201ENST00000478962 479 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 AC026412.2-201ENST00000512270 1075 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 NPM1P35-201ENST00000533043 868 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC1.53□□□□□ -2.16
CSMD3Q7Z407 AP000648.3-201ENST00000623539 4507 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC1.53□□□□□ -2.16
CSMD3Q7Z407 AC009487.2-201ENST00000420969 6821 ntBASIC1.53□□□□□ -2.16
CSMD3Q7Z407 OFD1P1Y-201ENST00000411756 1225 ntBASIC1.53□□□□□ -2.17
CSMD3Q7Z407 AC093392.2-201ENST00000450682 337 ntBASIC1.53□□□□□ -2.17
CSMD3Q7Z407 AC092185.1-201ENST00000491371 97 ntBASIC1.53□□□□□ -2.17
CSMD3Q7Z407 RNA5SP76-201ENST00000516277 87 ntBASIC1.53□□□□□ -2.17
CSMD3Q7Z407 CKS1BP7-201ENST00000522230 235 ntBASIC1.53□□□□□ -2.17
CSMD3Q7Z407 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC1.53□□□□□ -2.17
CSMD3Q7Z407 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC1.53□□□□□ -2.17
CSMD3Q7Z407 MIR4303-201ENST00000581299 66 ntBASIC1.53□□□□□ -2.17
CSMD3Q7Z407 AL353811.1-201ENST00000602851 736 ntTSL 5 BASIC1.53□□□□□ -2.17
CSMD3Q7Z407 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC1.53□□□□□ -2.17
CSMD3Q7Z407 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC1.53□□□□□ -2.17
CSMD3Q7Z407 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.53□□□□□ -2.17
CSMD3Q7Z407 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC245100.2-201ENST00000454544 1679 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 RNA5SP325-201ENST00000363756 130 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 MRRF-203ENST00000373723 1176 ntTSL 3 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 SNORD13-201ENST00000459299 104 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC007182.2-201ENST00000489251 402 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC068305.1-201ENST00000497406 726 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC135721.1-201ENST00000497954 479 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC005840.1-201ENST00000498412 377 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC1.52□□□□□ -2.17
CSMD3Q7Z407 RNA5SP182-201ENST00000516064 82 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 HSPE1P18-201ENST00000517602 280 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 OR4A45P-201ENST00000529954 901 ntBASIC1.52□□□□□ -2.17
CSMD3Q7Z407 OR7K1P-201ENST00000546439 926 ntBASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.2 ms