Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 ELOCP4-201ENST00000420090 333 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 Z82205.1-201ENST00000428456 297 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 RPL37P1-201ENST00000432310 284 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 AL353597.2-202ENST00000434901 373 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 IFNA20P-201ENST00000436840 528 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-261P-201ENST00000459506 102 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 RN7SL303P-201ENST00000469773 251 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 SLC25A15P5-201ENST00000508033 253 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 SNORA40.12-201ENST00000516329 111 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 BTF3P12-201ENST00000519620 469 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 AF279873.1-201ENST00000523393 313 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 NELL2-211ENST00000548826 559 ntTSL 2 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 HYKK-203ENST00000563233 734 ntTSL 2 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 MIR4742-201ENST00000581069 85 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 AC100781.1-201ENST00000597142 383 ntTSL 3 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 AC115621.1-201ENST00000604653 858 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 AC008966.2-201ENST00000606157 453 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-87P-201ENST00000607561 108 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 AC090425.1-201ENST00000610007 140 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 AC023043.4-201ENST00000612081 449 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 AL133173.2-201ENST00000614270 90 ntBASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 BX088723.1-201ENST00000637785 708 ntTSL 5 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CNKSR3Q6P9H4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 IKZF2-207ENST00000434687 3888 ntAPPRIS P2 TSL 5 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 MTND4P35-201ENST00000604257 1375 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 ACTR3BP2-202ENST00000623630 1338 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 OR11H5P-202ENST00000641612 1325 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-223P-201ENST00000362830 107 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.259-201ENST00000364619 101 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-657P-201ENST00000383904 107 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 SNORA70C-201ENST00000384538 135 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-1151P-201ENST00000384684 107 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 RNU6-1105P-201ENST00000384774 107 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 RPL5P18-201ENST00000406671 891 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AL358176.3-201ENST00000420757 454 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 RPL7AP25-201ENST00000423357 805 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AL031736.2-201ENST00000426573 787 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 RSU1P2-202ENST00000437884 485 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 GTF2IP13-201ENST00000438487 386 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 HMGB1P18-201ENST00000438801 619 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 EEF1A1P1-201ENST00000447052 739 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 Y_RNA.631-201ENST00000459607 101 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AC090142.1-201ENST00000465776 462 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AL163540.1-201ENST00000485382 386 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AC090096.1-201ENST00000489168 390 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 PCBP2P3-201ENST00000509726 843 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 Vault.3-201ENST00000516676 95 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 IGLVIV-65-201ENST00000517313 360 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 PRPF19P1-201ENST00000584766 898 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AC010525.2-201ENST00000590920 195 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 VN1R85P-201ENST00000601587 426 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AC103710.3-201ENST00000608157 948 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AC114781.5-201ENST00000615297 108 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 AL356585.4-201ENST00000623078 1229 ntBASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.09□□□□□ -1.59
CNKSR3Q6P9H4 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 SALL4P2-201ENST00000423288 2910 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 AC009643.2-201ENST00000603543 1448 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 RNU6-115P-201ENST00000364310 107 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 Y_RNA.387-201ENST00000383918 102 ntBASIC5.08□□□□□ -1.6
CNKSR3Q6P9H4 RNU6-456P-201ENST00000384493 107 ntBASIC5.08□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 150.5 ms