Protein–RNA interactions for Protein: Q5W0Q7

USPL1, SUMO-specific isopeptidase USPL1, humanhuman

Predictions only

Length 1,092 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USPL1Q5W0Q7 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 MMRN1-204ENST00000508372 3234 ntTSL 2 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 KMO-202ENST00000366557 4888 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 GABRG1-201ENST00000295452 6785 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 RNU6ATAC5P-201ENST00000388104 126 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC073136.2-201ENST00000417282 849 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 RPL7AP25-201ENST00000423357 805 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 MRPL50P4-201ENST00000446432 475 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AL121877.1-201ENST00000453704 622 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 RNU6ATAC28P-201ENST00000459249 118 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 RNU6-277P-201ENST00000516272 106 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 RNA5SP337-201ENST00000517007 109 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 RNU6-709P-201ENST00000517257 104 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AP003072.1-201ENST00000531740 145 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 DERA-209ENST00000532964 854 ntTSL 5 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC009509.2-201ENST00000538640 429 ntTSL 2 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 HPRT1P3-201ENST00000539521 576 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC023050.3-201ENST00000541142 333 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 BNIP3P6-201ENST00000549284 499 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC005668.1-201ENST00000571142 476 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 MIR4504-201ENST00000577413 92 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC010525.2-201ENST00000590920 195 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC113139.1-201ENST00000605049 239 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC093913.1-201ENST00000614178 329 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC123768.4-201ENST00000616244 701 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AL354950.2-201ENST00000617939 290 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 RMST_7.1-201ENST00000621935 268 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC000123.2-201ENST00000623124 461 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 OR14L1P-202ENST00000641545 3009 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 AC025031.4-201ENST00000621248 3271 ntBASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USPL1Q5W0Q7 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
USPL1Q5W0Q7 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.45
USPL1Q5W0Q7 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USPL1Q5W0Q7 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC5.96□□□□□ -1.45
USPL1Q5W0Q7 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC5.96□□□□□ -1.45
USPL1Q5W0Q7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 ACKR4-201ENST00000249887 1914 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 RNA5SP258-201ENST00000362750 119 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 RNY4P16-201ENST00000364768 94 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 RNU6-1207P-201ENST00000384343 107 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 U3.20-201ENST00000390909 217 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 TXNP7-201ENST00000406296 293 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 RN7SKP235-201ENST00000410662 305 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 MTND3P8-201ENST00000412909 339 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 AC127526.1-201ENST00000417526 366 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 RPS15AP12-201ENST00000419498 388 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 RPS27AP12-201ENST00000429552 465 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 UBE2V1P13-201ENST00000436983 439 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 AC104073.1-201ENST00000451988 151 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 RPL21P126-201ENST00000470049 478 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 AL163973.1-201ENST00000484753 577 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 RPL36AP41-201ENST00000493820 306 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 IGLVIV-65-201ENST00000517313 360 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 AL391813.2-201ENST00000609113 322 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 OR6R2P-201ENST00000609216 300 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 AC114781.5-201ENST00000615297 108 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 uc_338.12-201ENST00000616344 181 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 AC009951.1-201ENST00000623674 2614 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 PIGN-241ENST00000640050 3154 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 AC011460.1-201ENST00000636268 1834 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 GVINP1-202ENST00000531871 7271 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 OR4G1P-203ENST00000641984 1631 ntBASIC5.96□□□□□ -1.46
USPL1Q5W0Q7 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 NRK-204ENST00000540278 1687 ntTSL 2 BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 RNA5SP28-201ENST00000363841 119 ntBASIC5.95□□□□□ -1.46
USPL1Q5W0Q7 Y_RNA.474-201ENST00000384341 102 ntBASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 96.7 ms