Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC012182.1-201ENST00000570133 895 ntBASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 MIR5186-201ENST00000577504 120 ntBASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 LINC01893-201ENST00000581750 479 ntTSL 3 BASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 AC097065.2-201ENST00000608159 533 ntBASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 AC024560.3-201ENST00000608482 349 ntBASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 AC025588.4-201ENST00000615802 908 ntBASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 AL357559.1-201ENST00000622228 274 ntBASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 AC012442.3-202ENST00000636742 206 ntBASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 FP325313.1-201ENST00000638228 703 ntBASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 AP001350.1-201ENST00000601906 1524 ntBASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
PDLIM3Q53GG5 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC3.46□□□□□ -1.85
PDLIM3Q53GG5 AC011477.1-204ENST00000623416 1325 ntBASIC3.46□□□□□ -1.85
PDLIM3Q53GG5 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 RNU6-989P-201ENST00000362756 107 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 RNA5SP88-201ENST00000365560 109 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 RNU6-723P-201ENST00000383973 107 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 RNU6-952P-201ENST00000391164 108 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 PTMAP5-201ENST00000393073 333 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AL021407.1-201ENST00000404531 386 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 RNU2-15P-201ENST00000410692 191 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 RNU6-920P-201ENST00000410926 92 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 RNA5SP39-201ENST00000411245 120 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC083875.1-201ENST00000419509 405 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AL049610.1-201ENST00000423374 372 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 RPL21P66-201ENST00000426566 466 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 RPL23AP74-201ENST00000437246 471 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 HSPE1P28-201ENST00000443139 211 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 ZNF114P1-201ENST00000453500 292 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC108751.4-201ENST00000462931 1001 ntTSL 2 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 RPS4XP15-201ENST00000489210 795 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 F11-205ENST00000492972 1204 ntTSL 2 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC023424.2-201ENST00000493479 777 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC090453.1-201ENST00000495560 436 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 RPL7P47-201ENST00000497299 556 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 MTND5P4-201ENST00000514978 288 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 Y_RNA.688-201ENST00000516565 95 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AP004371.1-201ENST00000525240 214 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 OR7K1P-201ENST00000546439 926 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC007954.1-201ENST00000554198 494 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 HSPE1P3-201ENST00000559254 309 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 MIR3915-201ENST00000578518 97 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC020914.6-201ENST00000594327 272 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC010620.1-201ENST00000601088 1102 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC121247.2-201ENST00000604776 136 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC006329.2-201ENST00000611491 394 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC004223.4-201ENST00000612426 332 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AL021997.2-201ENST00000615674 271 ntBASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.86
PDLIM3Q53GG5 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 SYF2-202ENST00000354361 926 ntTSL 2 BASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 Y_RNA.302-201ENST00000364997 102 ntBASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 RNU6-339P-201ENST00000384310 107 ntBASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 MIR34B-201ENST00000385076 84 ntBASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 MIR320C1-201ENST00000408566 88 ntBASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 MIR1179-201ENST00000408703 91 ntBASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 AC090960.1-201ENST00000421072 306 ntBASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 AL391219.1-201ENST00000422570 483 ntBASIC3.45□□□□□ -1.86
PDLIM3Q53GG5 AC019178.2-201ENST00000423595 505 ntBASIC3.45□□□□□ -1.86
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