Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 AC090453.1-201ENST00000495560 436 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC108475.1-201ENST00000507880 950 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 ZDHHC20P3-201ENST00000531576 336 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 EEF1B2P4-201ENST00000551398 348 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC025884.1-201ENST00000556034 378 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 TVP23BP1-201ENST00000557500 617 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC015813.4-201ENST00000610469 179 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC005332.10-201ENST00000612725 619 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC100793.4-201ENST00000613683 429 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 ZYXP1-201ENST00000617638 118 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AL445363.3-201ENST00000623080 671 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AL356596.1-201ENST00000624230 379 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC025048.6-202ENST00000627667 438 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 OR5BE1P-202ENST00000641168 1176 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 ANKRD20A10P-201ENST00000457591 1515 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 MFSD8-242ENST00000641690 4199 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 AC027287.1-201ENST00000553115 1453 ntBASIC4.8□□□□□ -1.64
LONRF3Q496Y0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
LONRF3Q496Y0 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 PABPC1P9-201ENST00000426076 1612 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 Y_RNA.359-201ENST00000365498 102 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 RNU6-629P-201ENST00000384061 103 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 SNORA37-201ENST00000384504 129 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 SNORA70C-201ENST00000384538 135 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 RNY3P10-201ENST00000384764 102 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 MIR93-201ENST00000385024 80 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AL031679.1-201ENST00000400616 525 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 DHFRP6-201ENST00000401776 268 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC092447.6-201ENST00000414578 210 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 CDK8P2-201ENST00000415020 547 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 RPS7P15-201ENST00000415804 584 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 TOMM22P1-201ENST00000418578 312 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AL023581.1-201ENST00000423500 455 ntTSL 2 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 RPL23AP38-201ENST00000423801 469 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 EIF1P3-201ENST00000423841 334 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AL157831.1-201ENST00000426134 473 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 COX6CP12-201ENST00000446748 202 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 ST13P20-201ENST00000447996 1065 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 CFTRP1-201ENST00000456646 183 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC097493.1-201ENST00000463958 372 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 RPS4XP10-201ENST00000465034 731 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 RPL7P19-201ENST00000469948 618 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC010285.1-201ENST00000470580 392 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 BNIP3P41-201ENST00000503774 571 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AL121603.1-201ENST00000553815 142 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 PCMTD1P2-201ENST00000565017 355 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC136618.2-201ENST00000575091 400 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC053481.3-201ENST00000577881 843 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AP001094.1-201ENST00000579805 193 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC011477.2-201ENST00000590697 921 ntTSL 2 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 XIAPP1-201ENST00000603162 600 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 RNU6-88P-201ENST00000606801 100 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC103710.3-201ENST00000608157 948 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC107214.2-201ENST00000608204 634 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC025588.4-201ENST00000615802 908 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC004009.2-201ENST00000623016 728 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC008785.1-201ENST00000624475 456 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AL356473.1-201ENST00000406203 1408 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 AC006971.1-201ENST00000407916 4486 ntBASIC4.79□□□□□ -1.64
LONRF3Q496Y0 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
LONRF3Q496Y0 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 AL365440.1-201ENST00000436135 2167 ntBASIC4.78□□□□□ -1.64
LONRF3Q496Y0 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
LONRF3Q496Y0 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 160.6 ms