Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 RNU1-85P-201ENST00000364127 164 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 RNU6-115P-201ENST00000364310 107 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 IARS-201ENST00000375627 697 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX4Q33E94 DEFB109C-201ENST00000382575 264 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 DEFB109B-201ENST00000382656 264 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 SSXP10-201ENST00000402595 565 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 TANK-206ENST00000406287 875 ntTSL 5 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AL354719.1-201ENST00000406535 843 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 MIR1250-201ENST00000408098 113 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 RNA5SP129-201ENST00000410276 118 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 HMGN1P24-201ENST00000412282 298 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX4Q33E94 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX4Q33E94 RPL21P40-201ENST00000428586 483 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 AC005345.1-201ENST00000431868 217 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX4Q33E94 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC2.91□□□□□ -1.94
RFX4Q33E94 RPS24P6-201ENST00000452670 400 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 HMGN3P1-201ENST00000453847 193 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 AL365273.2-201ENST00000491114 492 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
RFX4Q33E94 RNF138P1-201ENST00000502765 546 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 MTCO3P44-201ENST00000510977 541 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 AC096734.1-201ENST00000511279 1128 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RFX4Q33E94 AC093752.1-206ENST00000511823 336 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX4Q33E94 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX4Q33E94 MTCO3P15-201ENST00000526563 574 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 AC019227.1-201ENST00000526902 510 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 NDUFS5P6-201ENST00000529136 295 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 CD69-203ENST00000536709 1020 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AC087242.1-201ENST00000536931 572 ntTSL 4 BASIC2.91□□□□□ -1.94
RFX4Q33E94 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX4Q33E94 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AC034268.2-201ENST00000571784 482 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 MTCO3P24-201ENST00000572729 782 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 MIR5186-201ENST00000577504 120 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 MIR4276-201ENST00000584832 70 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 AP001542.2-201ENST00000593141 364 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AL606834.3-201ENST00000602615 496 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 AL162713.1-201ENST00000604480 262 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AC069234.5-201ENST00000611056 416 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 MESTIT1_2.1-201ENST00000616328 235 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 CNBD1-207ENST00000620844 876 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
RFX4Q33E94 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX4Q33E94 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.91□□□□□ -1.94
RFX4Q33E94 AF117829.1-206ENST00000621883 3802 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
RFX4Q33E94 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
RFX4Q33E94 AL645568.2-201ENST00000432815 1337 ntBASIC2.91□□□□□ -1.94
RFX4Q33E94 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.94
RFX4Q33E94 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.9□□□□□ -1.94
RFX4Q33E94 Z83843.1-201ENST00000604070 3685 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 PPIP5K2-203ENST00000414217 5842 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
RFX4Q33E94 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RFX4Q33E94 RNU6-707P-201ENST00000364647 95 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 SNORA62.3-201ENST00000365110 153 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
RFX4Q33E94 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.9□□□□□ -1.95
RFX4Q33E94 AL031121.1-201ENST00000406553 254 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 SNORD88.1-201ENST00000408684 91 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.9□□□□□ -1.95
RFX4Q33E94 MRPL50P2-201ENST00000416821 482 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 AC096632.1-201ENST00000427395 310 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 GOT2P5-201ENST00000433995 546 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC2.9□□□□□ -1.95
RFX4Q33E94 NPM1P13-201ENST00000452663 865 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 NDUFA5P7-201ENST00000452914 242 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 AC104982.1-201ENST00000478775 574 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
RFX4Q33E94 RPL7P38-201ENST00000488396 739 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 RN7SL633P-201ENST00000488974 297 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC2.9□□□□□ -1.95
RFX4Q33E94 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.9□□□□□ -1.95
RFX4Q33E94 CSN1S1-204ENST00000507772 895 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.95
RFX4Q33E94 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC2.9□□□□□ -1.95
RFX4Q33E94 RNU1-61P-201ENST00000516107 151 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 SNORA19.3-201ENST00000516165 130 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 RNU6-1028P-201ENST00000517164 93 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 PTK2-220ENST00000520151 573 ntTSL 4 BASIC2.9□□□□□ -1.95
RFX4Q33E94 NECAB1-205ENST00000522820 811 ntTSL 2 BASIC2.9□□□□□ -1.95
RFX4Q33E94 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC2.9□□□□□ -1.95
RFX4Q33E94 LINC00508-201ENST00000538901 194 ntTSL 5 BASIC2.9□□□□□ -1.95
RFX4Q33E94 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC2.9□□□□□ -1.95
RFX4Q33E94 MIR3922-201ENST00000585192 84 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC2.9□□□□□ -1.95
RFX4Q33E94 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.9□□□□□ -1.95
RFX4Q33E94 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.9□□□□□ -1.95
RFX4Q33E94 AC073657.2-201ENST00000605661 303 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 AL136370.1-201ENST00000608166 691 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 AF129408.1-201ENST00000608767 431 ntBASIC2.9□□□□□ -1.95
RFX4Q33E94 uc_338.25-201ENST00000613756 156 ntBASIC2.9□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 126.7 ms