Protein–RNA interactions for Protein: Q07654

TFF3, Trefoil factor 3, humanhuman

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3Q07654 ZNF72P-201ENST00000425869 1908 ntBASIC1.99□□□□□ -2.09
TFF3Q07654 RAPGEF6-210ENST00000512052 3535 ntTSL 2 BASIC1.99□□□□□ -2.09
TFF3Q07654 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TFF3Q07654 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC1.99□□□□□ -2.09
TFF3Q07654 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC1.99□□□□□ -2.09
TFF3Q07654 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TFF3Q07654 RNA5SP99-201ENST00000364020 114 ntBASIC1.99□□□□□ -2.09
TFF3Q07654 RNU6-76P-201ENST00000384060 104 ntBASIC1.99□□□□□ -2.09
TFF3Q07654 AL591416.1-201ENST00000404015 867 ntBASIC1.99□□□□□ -2.09
TFF3Q07654 AC104332.2-201ENST00000429959 156 ntBASIC1.99□□□□□ -2.09
TFF3Q07654 AC098826.1-201ENST00000433943 471 ntBASIC1.99□□□□□ -2.09
TFF3Q07654 CR769767.1-201ENST00000436337 346 ntBASIC1.99□□□□□ -2.09
TFF3Q07654 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC1.99□□□□□ -2.09
TFF3Q07654 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC1.99□□□□□ -2.09
TFF3Q07654 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.99□□□□□ -2.09
TFF3Q07654 TRBV1-201ENST00000476502 284 ntBASIC1.99□□□□□ -2.09
TFF3Q07654 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.99□□□□□ -2.09
TFF3Q07654 LINC00888-204ENST00000487386 421 ntBASIC1.99□□□□□ -2.09
TFF3Q07654 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.99□□□□□ -2.09
TFF3Q07654 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.99□□□□□ -2.09
TFF3Q07654 MTCYBP20-201ENST00000524239 1129 ntBASIC1.99□□□□□ -2.09
TFF3Q07654 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC1.99□□□□□ -2.09
TFF3Q07654 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.99□□□□□ -2.09
TFF3Q07654 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.99□□□□□ -2.09
TFF3Q07654 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC1.99□□□□□ -2.09
TFF3Q07654 AC004943.3-201ENST00000624116 600 ntBASIC1.99□□□□□ -2.09
TFF3Q07654 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TFF3Q07654 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC1.99□□□□□ -2.09
TFF3Q07654 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
TFF3Q07654 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC1.99□□□□□ -2.09
TFF3Q07654 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC1.99□□□□□ -2.09
TFF3Q07654 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC1.98□□□□□ -2.09
TFF3Q07654 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TFF3Q07654 AL512646.1-201ENST00000269395 1077 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TFF3Q07654 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.98□□□□□ -2.09
TFF3Q07654 RN7SKP32-201ENST00000410167 303 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC1.98□□□□□ -2.09
TFF3Q07654 RPS15AP28-201ENST00000435088 386 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 AC129850.1-201ENST00000436203 508 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC1.98□□□□□ -2.09
TFF3Q07654 MTCO3P11-201ENST00000455103 774 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 HMGN2P23-201ENST00000456759 269 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.98□□□□□ -2.09
TFF3Q07654 AC068587.2-201ENST00000478386 781 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 LINC02488-201ENST00000504287 652 ntTSL 2 BASIC1.98□□□□□ -2.09
TFF3Q07654 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC1.98□□□□□ -2.09
TFF3Q07654 TMEM248P1-201ENST00000510579 951 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC1.98□□□□□ -2.09
TFF3Q07654 RNU6-548P-201ENST00000517083 115 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 ATP5F1P5-201ENST00000526403 760 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 OR5BN1P-201ENST00000532955 829 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC1.98□□□□□ -2.09
TFF3Q07654 AC009977.1-201ENST00000586015 570 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 AC083899.3-201ENST00000603413 594 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 AC123768.4-201ENST00000616244 701 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 VN1R7P-201ENST00000619242 903 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 Z99496.1-201ENST00000469424 1477 ntBASIC1.98□□□□□ -2.09
TFF3Q07654 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC1.97□□□□□ -2.09
TFF3Q07654 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TFF3Q07654 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
TFF3Q07654 METTL21EP-201ENST00000298105 713 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 VTRNA1-1-201ENST00000363120 99 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
TFF3Q07654 MIR221-201ENST00000385135 110 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 FAT1P1-201ENST00000406588 507 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 HMGN2P35-201ENST00000412164 270 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.97□□□□□ -2.09
TFF3Q07654 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC1.97□□□□□ -2.09
TFF3Q07654 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.97□□□□□ -2.09
TFF3Q07654 MTATP6P11-201ENST00000428071 670 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 AC092427.1-202ENST00000430569 476 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 UBE2V2P1-201ENST00000434717 398 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 AL353597.2-202ENST00000434901 373 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 AC009961.3-201ENST00000449832 765 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 MAL2-205ENST00000521048 575 ntTSL 4 BASIC1.97□□□□□ -2.09
TFF3Q07654 AC019227.1-201ENST00000526902 510 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC1.97□□□□□ -2.09
TFF3Q07654 AC012409.1-202ENST00000558449 639 ntTSL 2 BASIC1.97□□□□□ -2.09
TFF3Q07654 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC1.97□□□□□ -2.09
TFF3Q07654 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC1.97□□□□□ -2.09
TFF3Q07654 AC022884.3-201ENST00000579571 248 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC1.97□□□□□ -2.09
TFF3Q07654 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC1.97□□□□□ -2.09
TFF3Q07654 AC016877.3-201ENST00000606778 504 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 Xist_exon1.1-201ENST00000618930 85 ntBASIC1.97□□□□□ -2.09
TFF3Q07654 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.97□□□□□ -2.09
TFF3Q07654 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC1.97□□□□□ -2.09
TFF3Q07654 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
TFF3Q07654 MTCO1P9-201ENST00000505577 1534 ntBASIC1.96□□□□□ -2.09
TFF3Q07654 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
TFF3Q07654 GSTA9P-201ENST00000406231 611 ntBASIC1.96□□□□□ -2.1
TFF3Q07654 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC1.96□□□□□ -2.1
TFF3Q07654 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC1.96□□□□□ -2.1
TFF3Q07654 RANP7-201ENST00000418085 644 ntBASIC1.96□□□□□ -2.1
TFF3Q07654 SRIP2-201ENST00000428470 166 ntBASIC1.96□□□□□ -2.1
TFF3Q07654 AC109583.1-201ENST00000432156 268 ntBASIC1.96□□□□□ -2.1
TFF3Q07654 TRIM60P18-201ENST00000441518 828 ntBASIC1.96□□□□□ -2.1
TFF3Q07654 RPL7P52-201ENST00000449200 742 ntBASIC1.96□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms