Protein–RNA interactions for Protein: Q06945

SOX4, Transcription factor SOX-4, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX4Q06945 MIR4703-201ENST00000577728 79 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AC011477.5-201ENST00000586571 259 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC5.44□□□□□ -1.54
SOX4Q06945 AC073539.2-201ENST00000597113 165 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AC008782.1-201ENST00000603386 430 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 RPL23AP92-201ENST00000603609 255 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AL031666.3-201ENST00000609320 1006 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX4Q06945 AC245517.5-201ENST00000611529 162 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 AC133104.2-201ENST00000615272 193 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX4Q06945 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC5.44□□□□□ -1.54
SOX4Q06945 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX4Q06945 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX4Q06945 TXNDC8-201ENST00000374507 1787 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
SOX4Q06945 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
SOX4Q06945 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.44□□□□□ -1.54
SOX4Q06945 AC002525.1-201ENST00000624392 1622 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 PIGK-202ENST00000370812 4596 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
SOX4Q06945 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC5.44□□□□□ -1.54
SOX4Q06945 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.44□□□□□ -1.54
SOX4Q06945 MAPK10-338ENST00000641647 3362 ntBASIC5.44□□□□□ -1.54
SOX4Q06945 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX4Q06945 AP005432.1-201ENST00000580891 3485 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
SOX4Q06945 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SOX4Q06945 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX4Q06945 AC244517.1-201ENST00000606030 2086 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX4Q06945 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX4Q06945 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX4Q06945 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX4Q06945 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SOX4Q06945 Y_RNA.135-201ENST00000363439 95 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 SNORD113-7-201ENST00000363762 77 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 Y_RNA.176-201ENST00000363815 109 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 RN7SKP113-201ENST00000363891 295 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 U3.11-201ENST00000364476 212 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SOX4Q06945 ARL4A-204ENST00000396664 1144 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX4Q06945 SSXP10-201ENST00000402595 565 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 AL139397.2-201ENST00000404529 772 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 COX6B1P1-201ENST00000415962 213 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 AC068533.1-201ENST00000418542 415 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX4Q06945 AC005019.1-201ENST00000436455 431 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 AF228730.2-201ENST00000438784 848 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX4Q06945 AL354714.3-201ENST00000447284 493 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX4Q06945 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX4Q06945 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.43□□□□□ -1.54
SOX4Q06945 AF213884.1-201ENST00000488102 463 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 AC005912.1-201ENST00000495392 255 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX4Q06945 Y_RNA.654-201ENST00000497848 106 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 AC020893.1-201ENST00000502452 580 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 FTH1P21-201ENST00000512179 511 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 AP002404.1-201ENST00000532005 451 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 MDM2-233ENST00000545204 398 ntTSL 5 BASIC5.43□□□□□ -1.54
SOX4Q06945 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.43□□□□□ -1.54
SOX4Q06945 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.43□□□□□ -1.54
SOX4Q06945 AC022884.2-201ENST00000578535 580 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 AC069061.3-201ENST00000582254 823 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 Z82243.1-201ENST00000609432 473 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 PTPRO-204ENST00000445537 4062 ntAPPRIS ALT2 TSL 2 BASIC5.43□□□□□ -1.54
SOX4Q06945 AC009902.3-201ENST00000606235 2172 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
SOX4Q06945 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX4Q06945 AC121333.1-201ENST00000567488 2709 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX4Q06945 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
SOX4Q06945 AC109446.4-201ENST00000623235 2755 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 DOPEY1-201ENST00000237163 7995 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
SOX4Q06945 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX4Q06945 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
SOX4Q06945 ZNF807-201ENST00000328088 1707 ntBASIC5.43□□□□□ -1.54
SOX4Q06945 AC004158.1-201ENST00000564508 4319 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
SOX4Q06945 ZNF143-201ENST00000299606 2562 ntTSL 5 BASIC5.42□□□□□ -1.54
SOX4Q06945 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX4Q06945 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.42□□□□□ -1.54
SOX4Q06945 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.42□□□□□ -1.54
SOX4Q06945 RN7SKP103-201ENST00000363848 320 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 RNU5A-8P-201ENST00000364102 114 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX4Q06945 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
SOX4Q06945 RNU6-641P-201ENST00000384006 107 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 Y_RNA.482-201ENST00000384377 111 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 AF186996.5-201ENST00000418098 904 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 AC018865.2-201ENST00000423631 129 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 AL049745.1-201ENST00000433953 286 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 ZDHHC20P1-204ENST00000435787 423 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 FTH1P1-201ENST00000437933 532 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 AC020550.1-201ENST00000447385 163 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 RPL7P52-201ENST00000449200 742 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
SOX4Q06945 AL133244.1-201ENST00000456007 258 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 AC092324.1-201ENST00000468671 324 ntBASIC5.42□□□□□ -1.54
SOX4Q06945 RPL7P43-201ENST00000478876 753 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms