Protein–RNA interactions for Protein: Q01955

COL4A3, Collagen alpha-3(IV) chain, humanhuman

Predictions only

Length 1,670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3Q01955 AC025871.1-202ENST00000518819 432 ntTSL 3 BASIC4.43□□□□□ -1.7
COL4A3Q01955 TRMT10BP1-201ENST00000519377 943 ntBASIC4.43□□□□□ -1.7
COL4A3Q01955 AP003072.1-201ENST00000531740 145 ntBASIC4.43□□□□□ -1.7
COL4A3Q01955 MIR3936-201ENST00000584304 110 ntBASIC4.43□□□□□ -1.7
COL4A3Q01955 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC4.43□□□□□ -1.7
COL4A3Q01955 AP001429.1-201ENST00000602568 530 ntBASIC4.43□□□□□ -1.7
COL4A3Q01955 AL160290.3-201ENST00000604869 165 ntBASIC4.43□□□□□ -1.7
COL4A3Q01955 AL133173.2-201ENST00000614270 90 ntBASIC4.43□□□□□ -1.7
COL4A3Q01955 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.43□□□□□ -1.7
COL4A3Q01955 AL732618.1-201ENST00000623251 301 ntBASIC4.43□□□□□ -1.7
COL4A3Q01955 AL672167.1-203ENST00000641299 2975 ntBASIC4.43□□□□□ -1.7
COL4A3Q01955 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
COL4A3Q01955 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL4A3Q01955 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COL4A3Q01955 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL4A3Q01955 AC024560.2-201ENST00000507981 1497 ntBASIC4.43□□□□□ -1.7
COL4A3Q01955 LINC01933-204ENST00000524295 3591 ntTSL 2 BASIC4.43□□□□□ -1.7
COL4A3Q01955 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL4A3Q01955 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COL4A3Q01955 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COL4A3Q01955 ZNF33A-202ENST00000374618 6122 ntTSL 4 BASIC4.43□□□□□ -1.7
COL4A3Q01955 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
COL4A3Q01955 ZNF568-216ENST00000619231 3797 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
COL4A3Q01955 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
COL4A3Q01955 RNY3P3-201ENST00000363816 102 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 SNORD81.2-201ENST00000365153 76 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 TCEAL7-202ENST00000372666 852 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
COL4A3Q01955 MRPL42P2-201ENST00000403169 426 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.42□□□□□ -1.7
COL4A3Q01955 PDSS1P1-201ENST00000422953 1114 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AC233981.1-201ENST00000423224 461 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AL445669.1-201ENST00000426743 755 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AL035410.1-201ENST00000427409 427 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AC133104.1-201ENST00000429100 218 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.42□□□□□ -1.7
COL4A3Q01955 RPL31P35-201ENST00000431058 377 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.42□□□□□ -1.7
COL4A3Q01955 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A3Q01955 AF213884.1-201ENST00000488102 463 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AC104164.2-201ENST00000496953 495 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 ACTR3BP4-201ENST00000503033 1244 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.42□□□□□ -1.7
COL4A3Q01955 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC4.42□□□□□ -1.7
COL4A3Q01955 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.42□□□□□ -1.7
COL4A3Q01955 AC022690.1-201ENST00000526681 550 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 HPRT1P3-201ENST00000539521 576 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC4.42□□□□□ -1.7
COL4A3Q01955 AL359237.1-202ENST00000556168 487 ntTSL 5 BASIC4.42□□□□□ -1.7
COL4A3Q01955 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.42□□□□□ -1.7
COL4A3Q01955 AC099489.2-201ENST00000574976 260 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AC053481.4-201ENST00000583164 216 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AC091178.1-203ENST00000584586 279 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC4.42□□□□□ -1.7
COL4A3Q01955 AC079587.1-201ENST00000603846 277 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AL162730.1-201ENST00000605734 292 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 MIR98-201ENST00000606724 119 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AC011816.2-201ENST00000607089 556 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC4.42□□□□□ -1.7
COL4A3Q01955 AL132765.2-201ENST00000610812 351 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC4.42□□□□□ -1.7
COL4A3Q01955 AL121772.2-201ENST00000614331 297 ntBASIC4.42□□□□□ -1.7
COL4A3Q01955 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
COL4A3Q01955 ALG10B-201ENST00000308742 10253 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A3Q01955 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
COL4A3Q01955 UBR4-204ENST00000375254 15906 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A3Q01955 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.42□□□□□ -1.7
COL4A3Q01955 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A3Q01955 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
COL4A3Q01955 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A3Q01955 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
COL4A3Q01955 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A3Q01955 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
COL4A3Q01955 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A3Q01955 LINC02227-201ENST00000619068 3748 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A3Q01955 RNMT-202ENST00000383314 6250 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
COL4A3Q01955 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
COL4A3Q01955 Y_RNA.159-201ENST00000363674 87 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 AL080315.1-201ENST00000406055 466 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 RNU6ATAC-201ENST00000408749 126 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 MTCO3P12-201ENST00000416718 547 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A3Q01955 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.41□□□□□ -1.7
COL4A3Q01955 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC4.41□□□□□ -1.7
COL4A3Q01955 RPL7P49-201ENST00000471402 708 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 AC010301.1-201ENST00000473936 355 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 AC139783.2-201ENST00000504847 1145 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC4.41□□□□□ -1.7
COL4A3Q01955 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A3Q01955 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A3Q01955 AP003181.2-201ENST00000528941 181 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC4.41□□□□□ -1.7
COL4A3Q01955 AC078814.3-201ENST00000553036 491 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 RPL23AP97-201ENST00000568955 471 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 MIR5186-201ENST00000577504 120 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 AC015917.1-201ENST00000579654 510 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 AC018638.8-201ENST00000588755 281 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 BCRP9-201ENST00000605312 388 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 FAM27D1-201ENST00000612308 341 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 AC012314.7-201ENST00000619693 93 ntBASIC4.41□□□□□ -1.7
COL4A3Q01955 MAPK10-372ENST00000641954 3413 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms