Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.91□□□□□ -1.62
YBX1P67809 AC107399.1-201ENST00000451226 265 ntBASIC4.91□□□□□ -1.62
YBX1P67809 SNAP25-AS1-205ENST00000453544 368 ntTSL 5 BASIC4.91□□□□□ -1.62
YBX1P67809 RNU6-333P-201ENST00000459117 107 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AC097484.1-201ENST00000471148 389 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AP000893.1-201ENST00000474462 794 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AC000372.1-201ENST00000488818 646 ntTSL 2 BASIC4.91□□□□□ -1.62
YBX1P67809 AC005912.1-201ENST00000495392 255 ntBASIC4.91□□□□□ -1.62
YBX1P67809 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.91□□□□□ -1.62
YBX1P67809 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.91□□□□□ -1.62
YBX1P67809 PTP4A1P4-201ENST00000512479 322 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC4.91□□□□□ -1.62
YBX1P67809 AC022634.1-201ENST00000520765 532 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC4.91□□□□□ -1.62
YBX1P67809 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC4.91□□□□□ -1.62
YBX1P67809 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.91□□□□□ -1.62
YBX1P67809 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC4.91□□□□□ -1.62
YBX1P67809 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC4.91□□□□□ -1.62
YBX1P67809 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC4.91□□□□□ -1.62
YBX1P67809 RPL21P12-201ENST00000559810 515 ntBASIC4.91□□□□□ -1.62
YBX1P67809 LINC02284-202ENST00000560924 566 ntTSL 4 BASIC4.91□□□□□ -1.62
YBX1P67809 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.91□□□□□ -1.62
YBX1P67809 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.91□□□□□ -1.62
YBX1P67809 AC105254.2-201ENST00000603636 436 ntBASIC4.91□□□□□ -1.62
YBX1P67809 OR6R2P-201ENST00000609216 300 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AC243654.2-201ENST00000612843 443 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AL442067.1-201ENST00000613261 223 ntBASIC4.91□□□□□ -1.62
YBX1P67809 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC4.91□□□□□ -1.62
YBX1P67809 BX005214.3-202ENST00000619809 325 ntBASIC4.91□□□□□ -1.62
YBX1P67809 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
YBX1P67809 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.91□□□□□ -1.62
YBX1P67809 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
YBX1P67809 AC107081.3-201ENST00000612715 2034 ntBASIC4.9□□□□□ -1.62
YBX1P67809 NR3C2-202ENST00000344721 5712 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
YBX1P67809 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
YBX1P67809 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
YBX1P67809 PTPRD-202ENST00000356435 9472 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
YBX1P67809 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
YBX1P67809 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC4.9□□□□□ -1.62
YBX1P67809 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
YBX1P67809 OR1S2-201ENST00000302592 978 ntBASIC4.9□□□□□ -1.63
YBX1P67809 RNU5E-8P-201ENST00000363502 116 ntBASIC4.9□□□□□ -1.63
YBX1P67809 Y_RNA.339-201ENST00000365325 102 ntBASIC4.9□□□□□ -1.63
YBX1P67809 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
YBX1P67809 SNORA2.3-201ENST00000383920 135 ntBASIC4.9□□□□□ -1.63
YBX1P67809 Y_RNA.452-201ENST00000384202 108 ntBASIC4.9□□□□□ -1.63
YBX1P67809 RNU6-505P-201ENST00000384427 107 ntBASIC4.9□□□□□ -1.63
YBX1P67809 MIR568-201ENST00000385036 95 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AL606923.1-201ENST00000406616 190 ntBASIC4.9□□□□□ -1.63
YBX1P67809 RN7SKP235-201ENST00000410662 305 ntBASIC4.9□□□□□ -1.63
YBX1P67809 RNU6-370P-201ENST00000411008 104 ntBASIC4.9□□□□□ -1.63
YBX1P67809 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.9□□□□□ -1.63
YBX1P67809 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.9□□□□□ -1.63
YBX1P67809 AC009238.2-201ENST00000431026 355 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.9□□□□□ -1.63
YBX1P67809 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.9□□□□□ -1.63
YBX1P67809 SNRPEP4-201ENST00000435815 279 ntBASIC4.9□□□□□ -1.63
YBX1P67809 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
YBX1P67809 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.9□□□□□ -1.63
YBX1P67809 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC4.9□□□□□ -1.63
YBX1P67809 RPS29P15-201ENST00000458329 171 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AL135752.1-201ENST00000479477 471 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AC055855.1-201ENST00000489563 579 ntBASIC4.9□□□□□ -1.63
YBX1P67809 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC4.9□□□□□ -1.63
YBX1P67809 AC023424.1-201ENST00000496058 459 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AC010350.1-201ENST00000504908 231 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC4.9□□□□□ -1.63
YBX1P67809 AC091885.1-201ENST00000506658 268 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.9□□□□□ -1.63
YBX1P67809 AC004980.4-201ENST00000513375 203 ntBASIC4.9□□□□□ -1.63
YBX1P67809 SMURF2P1-201ENST00000514992 481 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.9□□□□□ -1.63
YBX1P67809 SNORD27.1-201ENST00000516319 72 ntBASIC4.9□□□□□ -1.63
YBX1P67809 COPS8P3-201ENST00000526024 482 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AP003122.3-201ENST00000526316 255 ntBASIC4.9□□□□□ -1.63
YBX1P67809 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.9□□□□□ -1.63
YBX1P67809 AC074050.1-201ENST00000563247 211 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AC018552.3-201ENST00000567416 561 ntBASIC4.9□□□□□ -1.63
YBX1P67809 MIR4691-201ENST00000583764 85 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AC105224.1-201ENST00000587055 421 ntBASIC4.9□□□□□ -1.63
YBX1P67809 LINC01905-206ENST00000593180 524 ntTSL 2 BASIC4.9□□□□□ -1.63
YBX1P67809 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC4.9□□□□□ -1.63
YBX1P67809 AC123786.2-201ENST00000603459 275 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AL355816.1-201ENST00000607951 118 ntBASIC4.9□□□□□ -1.63
YBX1P67809 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC4.9□□□□□ -1.63
YBX1P67809 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC4.9□□□□□ -1.63
YBX1P67809 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
YBX1P67809 AC107027.3-201ENST00000565095 3473 ntBASIC4.9□□□□□ -1.63
YBX1P67809 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC4.9□□□□□ -1.63
YBX1P67809 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.9□□□□□ -1.63
YBX1P67809 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
YBX1P67809 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
YBX1P67809 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
YBX1P67809 STX3-208ENST00000641815 3236 ntBASIC4.89□□□□□ -1.63
YBX1P67809 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
YBX1P67809 SLMAP-206ENST00000428312 4132 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
YBX1P67809 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms