Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 EPS15P1-201ENST00000448836 336 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 RAD23BP3-201ENST00000454157 1152 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 RPL36AP13-201ENST00000457490 317 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AP001992.1-205ENST00000462248 379 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 Y_RNA.695-201ENST00000516715 107 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.68□□□□□ -1.82
CLDN20P56880 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN20P56880 AC013828.2-201ENST00000532487 235 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AC024224.1-201ENST00000538284 609 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN20P56880 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN20P56880 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN20P56880 AC100872.1-201ENST00000577765 501 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN20P56880 MIR544B-201ENST00000582372 78 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 MIR5684-201ENST00000585074 65 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN20P56880 U73023.1-201ENST00000603134 700 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AP000403.1-201ENST00000603349 851 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 RNA5SP108-201ENST00000605921 117 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AL391497.1-201ENST00000608671 547 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AC103710.4-201ENST00000609301 899 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC3.68□□□□□ -1.82
CLDN20P56880 U73479.1-201ENST00000618062 168 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN20P56880 AC139792.2-201ENST00000624218 587 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 AC244205.2-202ENST00000635781 342 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
CLDN20P56880 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.68□□□□□ -1.82
CLDN20P56880 AL390237.1-201ENST00000404226 1415 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.68□□□□□ -1.82
CLDN20P56880 OR11H5P-202ENST00000641612 1325 ntBASIC3.68□□□□□ -1.82
CLDN20P56880 UACA-202ENST00000379983 4859 ntAPPRIS ALT2 TSL 5 BASIC3.67□□□□□ -1.82
CLDN20P56880 MAP3K21-201ENST00000366622 4005 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN20P56880 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN20P56880 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN20P56880 U3.4-201ENST00000363352 213 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 RN7SKP44-201ENST00000363602 316 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 Y_RNA.318-201ENST00000365131 97 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 RNA5SP283-201ENST00000365604 119 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 Y_RNA.493-201ENST00000384422 102 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 RNA5SP56-201ENST00000410277 118 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN20P56880 ITCH-IT1-201ENST00000418598 208 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN20P56880 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN20P56880 CYCSP46-201ENST00000423569 204 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 OR5BE1P-201ENST00000425977 939 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN20P56880 AC010153.1-201ENST00000432862 727 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN20P56880 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN20P56880 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN20P56880 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN20P56880 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN20P56880 AL360221.1-201ENST00000445989 335 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 AL162151.2-201ENST00000448875 158 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN20P56880 AL645939.1-201ENST00000453429 797 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 HMGB1P15-201ENST00000453854 435 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 RPL5P32-201ENST00000454085 879 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 MTCO2P18-201ENST00000457151 658 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN20P56880 AL132838.2-201ENST00000492041 314 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 RPL29P14-201ENST00000495837 428 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN20P56880 AC034159.1-201ENST00000513885 583 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN20P56880 RNU7-143P-201ENST00000516781 65 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 RNU4-60P-201ENST00000517239 135 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 IGKV2-38-201ENST00000517443 247 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN20P56880 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN20P56880 ARL6IP1P1-201ENST00000545836 610 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 AC023161.2-201ENST00000551218 780 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.67□□□□□ -1.82
CLDN20P56880 AC024909.2-201ENST00000553035 286 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.67□□□□□ -1.82
CLDN20P56880 AC107954.1-201ENST00000565906 727 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 AC091489.2-201ENST00000566263 604 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 AC007599.1-201ENST00000568688 1174 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 MIR4644-201ENST00000579929 84 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN20P56880 AL353997.4-201ENST00000586196 166 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 AL669831.4-202ENST00000590817 238 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.67□□□□□ -1.82
CLDN20P56880 AL596245.1-201ENST00000618994 362 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 AC006065.5-201ENST00000623427 349 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN20P56880 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN20P56880 OR5BE1P-202ENST00000641168 1176 ntBASIC3.67□□□□□ -1.82
CLDN20P56880 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN20P56880 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN20P56880 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.67□□□□□ -1.82
CLDN20P56880 ZC3H14-206ENST00000406216 1341 ntTSL 3 BASIC3.67□□□□□ -1.82
CLDN20P56880 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN20P56880 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.67□□□□□ -1.82
CLDN20P56880 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN20P56880 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
CLDN20P56880 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.67□□□□□ -1.82
CLDN20P56880 AL133412.1-201ENST00000380194 2992 ntBASIC3.66□□□□□ -1.82
CLDN20P56880 AL136964.1-201ENST00000622038 2990 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 519.9 ms