Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH13P55290 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH13P55290 DMXL1-201ENST00000311085 11072 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH13P55290 CCDC91-201ENST00000381259 2334 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH13P55290 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH13P55290 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.66□□□□□ -1.82
CDH13P55290 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
CDH13P55290 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
CDH13P55290 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CDH13P55290 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.82
CDH13P55290 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CDH13P55290 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.65□□□□□ -1.82
CDH13P55290 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
CDH13P55290 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH13P55290 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH13P55290 RNU6-213P-201ENST00000384051 104 ntBASIC3.65□□□□□ -1.83
CDH13P55290 U1.1-201ENST00000384101 164 ntBASIC3.65□□□□□ -1.83
CDH13P55290 ATP5F1P3-201ENST00000397213 657 ntBASIC3.65□□□□□ -1.83
CDH13P55290 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH13P55290 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH13P55290 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH13P55290 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH13P55290 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH13P55290 AC002381.1-201ENST00000447049 280 ntBASIC3.65□□□□□ -1.83
CDH13P55290 RPL7P52-201ENST00000449200 742 ntBASIC3.65□□□□□ -1.83
CDH13P55290 Z82190.1-201ENST00000454534 490 ntBASIC3.65□□□□□ -1.83
CDH13P55290 AC010285.1-201ENST00000470580 392 ntBASIC3.65□□□□□ -1.83
CDH13P55290 LINC00888-204ENST00000487386 421 ntBASIC3.65□□□□□ -1.83
CDH13P55290 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH13P55290 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH13P55290 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH13P55290 RNA5SP309-201ENST00000516670 106 ntBASIC3.65□□□□□ -1.83
CDH13P55290 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH13P55290 AC103796.1-201ENST00000530663 358 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
CDH13P55290 AC107882.1-201ENST00000530837 477 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH13P55290 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH13P55290 AC008011.1-201ENST00000545989 227 ntBASIC3.65□□□□□ -1.83
CDH13P55290 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.65□□□□□ -1.83
CDH13P55290 AC126177.3-201ENST00000551839 688 ntBASIC3.65□□□□□ -1.83
CDH13P55290 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH13P55290 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.65□□□□□ -1.83
CDH13P55290 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.65□□□□□ -1.83
CDH13P55290 SNORD84-203ENST00000584275 78 ntBASIC3.65□□□□□ -1.83
CDH13P55290 AC007687.1-201ENST00000602704 304 ntBASIC3.65□□□□□ -1.83
CDH13P55290 AC021171.1-201ENST00000603137 706 ntBASIC3.65□□□□□ -1.83
CDH13P55290 AC012669.1-201ENST00000603209 283 ntBASIC3.65□□□□□ -1.83
CDH13P55290 ELOCP35-201ENST00000604289 336 ntBASIC3.65□□□□□ -1.83
CDH13P55290 AC106791.2-201ENST00000604680 391 ntBASIC3.65□□□□□ -1.83
CDH13P55290 AC090186.1-201ENST00000605991 572 ntBASIC3.65□□□□□ -1.83
CDH13P55290 AL360267.1-201ENST00000607309 666 ntTSL 4 BASIC3.65□□□□□ -1.83
CDH13P55290 AC023043.4-201ENST00000612081 449 ntBASIC3.65□□□□□ -1.83
CDH13P55290 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.65□□□□□ -1.83
CDH13P55290 DLEU1_2.1-201ENST00000617920 342 ntBASIC3.65□□□□□ -1.83
CDH13P55290 AL607023.1-201ENST00000620045 248 ntBASIC3.65□□□□□ -1.83
CDH13P55290 AC131159.1-201ENST00000621854 213 ntBASIC3.65□□□□□ -1.83
CDH13P55290 CRYM-AS1-204ENST00000637983 556 ntBASIC3.65□□□□□ -1.83
CDH13P55290 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH13P55290 AC079160.1-202ENST00000508406 2795 ntTSL 5 BASIC3.65□□□□□ -1.83
CDH13P55290 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
CDH13P55290 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.65□□□□□ -1.83
CDH13P55290 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.65□□□□□ -1.83
CDH13P55290 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
CDH13P55290 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH13P55290 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
CDH13P55290 ESCO1-201ENST00000269214 4523 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
CDH13P55290 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH13P55290 SPRR2C-201ENST00000290702 219 ntBASIC3.64□□□□□ -1.83
CDH13P55290 AL161781.1-201ENST00000354277 403 ntBASIC3.64□□□□□ -1.83
CDH13P55290 RNU6-343P-201ENST00000364709 104 ntBASIC3.64□□□□□ -1.83
CDH13P55290 AL590084.2-201ENST00000401481 382 ntBASIC3.64□□□□□ -1.83
CDH13P55290 AL117339.2-201ENST00000430475 180 ntBASIC3.64□□□□□ -1.83
CDH13P55290 MTND5P25-201ENST00000430499 799 ntBASIC3.64□□□□□ -1.83
CDH13P55290 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.64□□□□□ -1.83
CDH13P55290 MTCO1P27-201ENST00000448269 226 ntBASIC3.64□□□□□ -1.83
CDH13P55290 PAXBP1P1-201ENST00000449315 447 ntBASIC3.64□□□□□ -1.83
CDH13P55290 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH13P55290 RNU7-170P-201ENST00000459303 61 ntBASIC3.64□□□□□ -1.83
CDH13P55290 OR9M1P-201ENST00000459641 921 ntBASIC3.64□□□□□ -1.83
CDH13P55290 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.64□□□□□ -1.83
CDH13P55290 AC093809.1-201ENST00000509155 340 ntBASIC3.64□□□□□ -1.83
CDH13P55290 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH13P55290 SCARNA14-201ENST00000516903 136 ntBASIC3.64□□□□□ -1.83
CDH13P55290 RNU6-1231P-201ENST00000517185 103 ntBASIC3.64□□□□□ -1.83
CDH13P55290 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH13P55290 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH13P55290 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
CDH13P55290 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH13P55290 OR7K1P-201ENST00000546439 926 ntBASIC3.64□□□□□ -1.83
CDH13P55290 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH13P55290 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.64□□□□□ -1.83
CDH13P55290 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC3.64□□□□□ -1.83
CDH13P55290 AC006960.3-201ENST00000561845 705 ntBASIC3.64□□□□□ -1.83
CDH13P55290 AC087481.2-201ENST00000565492 330 ntBASIC3.64□□□□□ -1.83
CDH13P55290 AC008751.2-201ENST00000597885 980 ntBASIC3.64□□□□□ -1.83
CDH13P55290 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.64□□□□□ -1.83
CDH13P55290 AL606490.9-201ENST00000603331 271 ntBASIC3.64□□□□□ -1.83
CDH13P55290 AL049634.3-201ENST00000604968 457 ntBASIC3.64□□□□□ -1.83
CDH13P55290 AC092142.2-201ENST00000614642 354 ntTSL 3 BASIC3.64□□□□□ -1.83
CDH13P55290 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
CDH13P55290 AC097520.1-201ENST00000624435 385 ntBASIC3.64□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms