Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC026412.2-201ENST00000512270 1075 ntBASIC4.03□□□□□ -1.76
CLCN3P51790 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC4.03□□□□□ -1.76
CLCN3P51790 PTK2-220ENST00000520151 573 ntTSL 4 BASIC4.03□□□□□ -1.76
CLCN3P51790 AC107909.2-201ENST00000520844 493 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCN3P51790 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLCN3P51790 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCN3P51790 AC090616.2-202ENST00000584248 222 ntBASIC4.03□□□□□ -1.76
CLCN3P51790 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCN3P51790 AC020914.6-201ENST00000594327 272 ntBASIC4.03□□□□□ -1.76
CLCN3P51790 AC012468.1-201ENST00000604888 430 ntBASIC4.03□□□□□ -1.76
CLCN3P51790 ZRANB2-AS2-218ENST00000608360 722 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCN3P51790 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCN3P51790 AC092140.2-201ENST00000618027 521 ntBASIC4.03□□□□□ -1.76
CLCN3P51790 AC233309.1-201ENST00000619522 751 ntBASIC4.03□□□□□ -1.76
CLCN3P51790 LINC01232-201ENST00000625254 836 ntTSL 5 BASIC4.03□□□□□ -1.76
CLCN3P51790 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.03□□□□□ -1.76
CLCN3P51790 AL392088.2-201ENST00000637607 285 ntBASIC4.03□□□□□ -1.76
CLCN3P51790 U6.101-201ENST00000637707 76 ntBASIC4.03□□□□□ -1.76
CLCN3P51790 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC4.03□□□□□ -1.76
CLCN3P51790 MTCO1P12-201ENST00000414273 1543 ntBASIC4.03□□□□□ -1.76
CLCN3P51790 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
CLCN3P51790 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCN3P51790 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
CLCN3P51790 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.03□□□□□ -1.76
CLCN3P51790 OR4G11P-202ENST00000642116 1414 ntBASIC4.03□□□□□ -1.76
CLCN3P51790 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.03□□□□□ -1.77
CLCN3P51790 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.03□□□□□ -1.77
CLCN3P51790 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
CLCN3P51790 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLCN3P51790 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLCN3P51790 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCN3P51790 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCN3P51790 MTND5P24-201ENST00000438892 1767 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLCN3P51790 MTCO1P23-201ENST00000415223 1526 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 RNU6-553P-201ENST00000364047 96 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 Y_RNA.201-201ENST00000364052 96 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 SNORA4.1-201ENST00000364263 144 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 RNU4-24P-201ENST00000364565 139 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CLCN3P51790 C8orf22-202ENST00000399653 1272 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCN3P51790 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLCN3P51790 USP9YP33-201ENST00000412220 421 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCN3P51790 HMGB3P20-201ENST00000417997 600 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 DBIP2-201ENST00000419076 262 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 AL953862.1-201ENST00000423016 168 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 AC019178.2-201ENST00000423595 505 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCN3P51790 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCN3P51790 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC4.02□□□□□ -1.77
CLCN3P51790 AC073063.1-201ENST00000434352 607 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 NDUFB1P1-201ENST00000435191 180 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 USP9YP35-201ENST00000435696 412 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 PRDX3P3-201ENST00000447765 522 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 ARPC3P5-201ENST00000448802 534 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCN3P51790 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCN3P51790 RNU7-125P-201ENST00000458760 62 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 AC097493.1-201ENST00000463958 372 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
CLCN3P51790 LINC00888-204ENST00000487386 421 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 AC108078.3-201ENST00000502633 489 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 MTCYBP17-201ENST00000503579 789 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 AC093767.1-201ENST00000504523 156 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 RNA5SP216-201ENST00000516111 123 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 RNU6-232P-201ENST00000517144 64 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 RNU4-60P-201ENST00000517239 135 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 AC104986.1-201ENST00000517978 436 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCN3P51790 RANP9-201ENST00000519957 271 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 NAP1L1P1-201ENST00000524793 1063 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 AP003730.2-202ENST00000527281 774 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCN3P51790 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC4.02□□□□□ -1.77
CLCN3P51790 ELOCP32-201ENST00000548625 324 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 AC023161.2-201ENST00000551218 780 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCN3P51790 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC4.02□□□□□ -1.77
CLCN3P51790 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCN3P51790 AC092354.2-201ENST00000607786 514 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
CLCN3P51790 AC091905.1-201ENST00000624400 311 ntBASIC4.02□□□□□ -1.77
CLCN3P51790 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.02□□□□□ -1.77
CLCN3P51790 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
CLCN3P51790 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
CLCN3P51790 PPP1R12A-204ENST00000546369 2977 ntTSL 2 BASIC4.02□□□□□ -1.77
CLCN3P51790 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
CLCN3P51790 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC4.01□□□□□ -1.77
CLCN3P51790 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
CLCN3P51790 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLCN3P51790 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLCN3P51790 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLCN3P51790 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC4.01□□□□□ -1.77
CLCN3P51790 CFL2-202ENST00000341223 3131 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLCN3P51790 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
CLCN3P51790 Y_RNA.333-201ENST00000365274 102 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
CLCN3P51790 AC016769.3-201ENST00000396562 315 ntBASIC4.01□□□□□ -1.77
CLCN3P51790 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms