Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 HIST1H2APS3-201ENST00000403259 134 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AP000432.1-201ENST00000416641 516 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF4P48230 UBTFL3-201ENST00000418934 1024 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 SEPT2P1-201ENST00000419651 180 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AL137014.1-201ENST00000420490 1226 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AL513174.1-201ENST00000423182 629 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.55□□□□□ -1.68
TM4SF4P48230 SKP1P1-201ENST00000438081 489 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AL512286.1-201ENST00000439244 400 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF4P48230 AC118469.1-201ENST00000442943 488 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AL121871.1-201ENST00000443413 436 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF4P48230 BMI1P1-201ENST00000445879 941 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 RPL21P23-201ENST00000446654 460 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AC115115.1-201ENST00000449927 248 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 SETP11-201ENST00000473027 690 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 UBTFL6-201ENST00000477929 1024 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.55□□□□□ -1.68
TM4SF4P48230 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF4P48230 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF4P48230 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.55□□□□□ -1.68
TM4SF4P48230 AC093677.1-201ENST00000514414 678 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AC116347.2-201ENST00000514912 523 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 Vault.1-201ENST00000516474 102 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AC090151.1-201ENST00000520784 730 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.55□□□□□ -1.68
TM4SF4P48230 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.55□□□□□ -1.68
TM4SF4P48230 AC006960.3-201ENST00000561845 705 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC4.55□□□□□ -1.68
TM4SF4P48230 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF4P48230 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.55□□□□□ -1.68
TM4SF4P48230 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.55□□□□□ -1.68
TM4SF4P48230 AC233280.2-201ENST00000603917 1070 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.55□□□□□ -1.68
TM4SF4P48230 ALG13-230ENST00000623189 458 ntTSL 3 BASIC4.55□□□□□ -1.68
TM4SF4P48230 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF4P48230 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
TM4SF4P48230 THUMPD3P1-201ENST00000506556 1480 ntBASIC4.55□□□□□ -1.68
TM4SF4P48230 PABPC1P9-201ENST00000426076 1612 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM4SF4P48230 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
TM4SF4P48230 SNORD35B-201ENST00000363660 87 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 RNA5SP51-201ENST00000364750 119 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
TM4SF4P48230 SNORD116-9-201ENST00000384000 95 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 SNORD116-3-201ENST00000384287 95 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 SNORD116-1-201ENST00000384335 95 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 SNORD116-7-201ENST00000384404 95 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 SNORD116-5-201ENST00000384462 95 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 SNORA26.8-201ENST00000391306 124 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC4.54□□□□□ -1.68
TM4SF4P48230 EI24P1-201ENST00000416584 867 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.54□□□□□ -1.68
TM4SF4P48230 AL365184.2-201ENST00000431139 435 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 MTND4LP10-201ENST00000435146 291 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 MTCYBP45-201ENST00000435243 565 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 RPL37P21-201ENST00000435890 276 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.54□□□□□ -1.68
TM4SF4P48230 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.54□□□□□ -1.68
TM4SF4P48230 FABP3P2-201ENST00000453169 399 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 AL445669.2-201ENST00000454425 421 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 AL122001.1-201ENST00000457027 370 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 AC109486.1-201ENST00000486833 374 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 ARL4AP1-201ENST00000503220 705 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.54□□□□□ -1.68
TM4SF4P48230 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.54□□□□□ -1.68
TM4SF4P48230 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.54□□□□□ -1.68
TM4SF4P48230 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.54□□□□□ -1.68
TM4SF4P48230 AP004371.1-201ENST00000525240 214 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.54□□□□□ -1.68
TM4SF4P48230 AC023161.2-201ENST00000551218 780 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 SETP7-201ENST00000552169 453 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC4.54□□□□□ -1.68
TM4SF4P48230 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC4.54□□□□□ -1.68
TM4SF4P48230 ROCK1P1-201ENST00000573767 549 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 MIR544B-201ENST00000582372 78 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 U73023.1-201ENST00000603134 700 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.54□□□□□ -1.68
TM4SF4P48230 AC009237.17-201ENST00000618111 748 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 Z69908.1-201ENST00000622603 247 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 AC243312.2-201ENST00000623340 601 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 AL392088.2-201ENST00000637607 285 ntBASIC4.54□□□□□ -1.68
TM4SF4P48230 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
TM4SF4P48230 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
TM4SF4P48230 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.54□□□□□ -1.68
TM4SF4P48230 LINC00283-201ENST00000430111 1947 ntTSL 5 BASIC4.54□□□□□ -1.68
TM4SF4P48230 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.54□□□□□ -1.68
TM4SF4P48230 UBE3A-202ENST00000397954 2873 ntTSL 5 BASIC4.54□□□□□ -1.68
TM4SF4P48230 AC092821.1-204ENST00000518709 3552 ntTSL 5 BASIC4.54□□□□□ -1.68
TM4SF4P48230 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
TM4SF4P48230 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
TM4SF4P48230 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC4.53□□□□□ -1.68
TM4SF4P48230 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
TM4SF4P48230 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
TM4SF4P48230 ATP8A2P3-201ENST00000426792 1536 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 RNU6-335P-201ENST00000364563 113 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 RNU6-1207P-201ENST00000384343 107 ntBASIC4.53□□□□□ -1.68
TM4SF4P48230 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
TM4SF4P48230 AL603766.1-201ENST00000407763 664 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 127.6 ms