Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCLP35914 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCLP35914 RPL21P112-201ENST00000434403 463 ntBASIC3.32□□□□□ -1.88
HMGCLP35914 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGCLP35914 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCLP35914 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCLP35914 RPL21P10-201ENST00000463521 490 ntBASIC3.32□□□□□ -1.88
HMGCLP35914 AC010401.1-201ENST00000463867 348 ntBASIC3.32□□□□□ -1.88
HMGCLP35914 HMGB3P15-201ENST00000507326 574 ntBASIC3.32□□□□□ -1.88
HMGCLP35914 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCLP35914 AC016065.2-201ENST00000514530 444 ntBASIC3.32□□□□□ -1.88
HMGCLP35914 MRPS36P3-201ENST00000519284 130 ntBASIC3.32□□□□□ -1.88
HMGCLP35914 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCLP35914 LINC02294-201ENST00000549330 497 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGCLP35914 MTCYBP28-201ENST00000566728 1132 ntBASIC3.32□□□□□ -1.88
HMGCLP35914 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCLP35914 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCLP35914 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.32□□□□□ -1.88
HMGCLP35914 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCLP35914 AP001269.3-201ENST00000588718 329 ntBASIC3.32□□□□□ -1.88
HMGCLP35914 LINC01928-201ENST00000591029 504 ntTSL 3 BASIC3.32□□□□□ -1.88
HMGCLP35914 AC107075.1-201ENST00000613695 314 ntBASIC3.32□□□□□ -1.88
HMGCLP35914 AC006386.1-201ENST00000619436 415 ntBASIC3.32□□□□□ -1.88
HMGCLP35914 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCLP35914 RMDN2-AS1-204ENST00000626669 448 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCLP35914 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
HMGCLP35914 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.32□□□□□ -1.88
HMGCLP35914 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
HMGCLP35914 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCLP35914 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCLP35914 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
HMGCLP35914 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGCLP35914 IFNG-201ENST00000229135 1218 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
HMGCLP35914 RNU6-1243P-201ENST00000364028 107 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 SNORD116.1-201ENST00000365628 92 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 RPL23AP47-201ENST00000408017 460 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 RPS3AP25-201ENST00000411660 793 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC093578.1-201ENST00000415219 368 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCLP35914 BOLA3P4-201ENST00000418151 400 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC092634.6-201ENST00000418558 192 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AL389915.1-201ENST00000422463 466 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCLP35914 AL390774.2-201ENST00000423942 788 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCLP35914 DPRXP1-201ENST00000426312 460 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCLP35914 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCLP35914 YME1L1P1-201ENST00000429435 297 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 PPEF1-AS1-201ENST00000430641 430 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGCLP35914 AC005345.1-201ENST00000431868 217 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AL445259.1-202ENST00000434768 379 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCLP35914 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGCLP35914 Z77249.1-201ENST00000444622 1175 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC007327.1-201ENST00000447461 264 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 RPL29P29-201ENST00000448725 423 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC087312.1-201ENST00000471411 480 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC092185.1-201ENST00000491371 97 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC084024.2-201ENST00000503480 791 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGCLP35914 WBP1LP4-201ENST00000505043 344 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.31□□□□□ -1.88
HMGCLP35914 TXNP6-201ENST00000510190 310 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGCLP35914 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC087808.1-201ENST00000520501 361 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC027309.2-201ENST00000520566 192 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 NDUFB9P3-201ENST00000521269 501 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGCLP35914 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCLP35914 AC007688.2-201ENST00000545158 369 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCLP35914 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGCLP35914 AL163153.1-201ENST00000554223 283 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 OR4T1P-201ENST00000554933 911 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 MTND4P33-201ENST00000556706 766 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGCLP35914 AC023813.2-201ENST00000564321 469 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC093519.1-201ENST00000566109 298 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.31□□□□□ -1.88
HMGCLP35914 AC074051.3-201ENST00000570238 358 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGCLP35914 ELOCP35-201ENST00000604289 336 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.31□□□□□ -1.88
HMGCLP35914 uc_338.1-201ENST00000612113 180 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.31□□□□□ -1.88
HMGCLP35914 AC098679.5-201ENST00000624394 571 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 FAM157B-203ENST00000639350 358 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 MKKS-204ENST00000639674 192 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 SRP72P2-201ENST00000344851 1979 ntBASIC3.31□□□□□ -1.88
HMGCLP35914 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCLP35914 AL079305.1-201ENST00000623159 3008 ntBASIC3.3□□□□□ -1.88
HMGCLP35914 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.3□□□□□ -1.88
HMGCLP35914 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.3□□□□□ -1.88
HMGCLP35914 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCLP35914 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCLP35914 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
HMGCLP35914 RNU6-1066P-201ENST00000363573 105 ntBASIC3.3□□□□□ -1.88
HMGCLP35914 RNU6-621P-201ENST00000364752 109 ntBASIC3.3□□□□□ -1.88
HMGCLP35914 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 135.6 ms