Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.1□□□□□ -1.91
SHMT2P34897 POU5F1P7-201ENST00000508759 541 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 MTCYBP37-201ENST00000510642 1133 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 MTCO3P44-201ENST00000510977 541 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 AC008837.1-201ENST00000511513 412 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC3.1□□□□□ -1.91
SHMT2P34897 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC3.1□□□□□ -1.91
SHMT2P34897 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC3.1□□□□□ -1.91
SHMT2P34897 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3.1□□□□□ -1.91
SHMT2P34897 TRAV37-201ENST00000553906 342 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.1□□□□□ -1.91
SHMT2P34897 AL163153.1-201ENST00000554223 283 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 OR4T1P-201ENST00000554933 911 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.1□□□□□ -1.91
SHMT2P34897 AC044913.1-201ENST00000557200 430 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC3.1□□□□□ -1.91
SHMT2P34897 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.1□□□□□ -1.91
SHMT2P34897 AC122134.1-202ENST00000569111 1201 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
SHMT2P34897 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC3.1□□□□□ -1.91
SHMT2P34897 AC113368.1-201ENST00000603736 382 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 BNIP3P31-201ENST00000604515 566 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 YPEL5P2-201ENST00000605553 359 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 AC107294.3-201ENST00000609211 526 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 uc_338.25-201ENST00000613756 156 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
SHMT2P34897 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC3.1□□□□□ -1.91
SHMT2P34897 AC007527.2-201ENST00000621825 546 ntTSL 5 BASIC3.1□□□□□ -1.91
SHMT2P34897 PCNP-208ENST00000627393 136 ntTSL 2 BASIC3.1□□□□□ -1.91
SHMT2P34897 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.1□□□□□ -1.91
SHMT2P34897 SUCLA2P2-201ENST00000417269 1309 ntBASIC3.1□□□□□ -1.91
SHMT2P34897 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.1□□□□□ -1.91
SHMT2P34897 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.1□□□□□ -1.91
SHMT2P34897 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SHMT2P34897 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.09□□□□□ -1.91
SHMT2P34897 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHMT2P34897 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
SHMT2P34897 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHMT2P34897 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHMT2P34897 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHMT2P34897 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.09□□□□□ -1.91
SHMT2P34897 RNU6-339P-201ENST00000384310 107 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 RNU6-1176P-201ENST00000390955 107 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 BTF3P8-201ENST00000414577 526 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.09□□□□□ -1.91
SHMT2P34897 PTP4A1P7-201ENST00000423476 514 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 C1DP1-201ENST00000426049 402 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 AC005345.1-201ENST00000431868 217 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 AL353705.1-201ENST00000433468 480 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 COX6CP18-201ENST00000448769 222 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 AC115115.1-201ENST00000449927 248 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 RPL21P104-201ENST00000464143 478 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 RPL7P5-201ENST00000471472 736 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 AL136126.1-201ENST00000473603 402 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 AC008427.1-201ENST00000503102 655 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 RNA5SP217-201ENST00000515959 91 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 SNORA70.24-201ENST00000517233 118 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 CDKL3-207ENST00000521755 586 ntTSL 5 BASIC3.09□□□□□ -1.91
SHMT2P34897 AC104417.1-201ENST00000523974 751 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 AC019227.1-201ENST00000526902 510 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.09□□□□□ -1.91
SHMT2P34897 AC107954.1-201ENST00000565906 727 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC3.09□□□□□ -1.91
SHMT2P34897 SNRPGP15-201ENST00000600149 222 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC3.09□□□□□ -1.91
SHMT2P34897 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.09□□□□□ -1.91
SHMT2P34897 AC025588.3-201ENST00000604182 274 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.09□□□□□ -1.91
SHMT2P34897 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3.09□□□□□ -1.91
SHMT2P34897 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.09□□□□□ -1.91
SHMT2P34897 AL442067.2-201ENST00000614033 363 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 U73479.1-201ENST00000618062 168 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.09□□□□□ -1.91
SHMT2P34897 AC091903.1-201ENST00000624322 454 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 MIR3651-201ENST00000630427 90 ntBASIC3.09□□□□□ -1.91
SHMT2P34897 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.09□□□□□ -1.91
SHMT2P34897 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
SHMT2P34897 DBF4P1-201ENST00000412976 1892 ntBASIC3.09□□□□□ -1.92
SHMT2P34897 AC130650.2-201ENST00000618736 2403 ntBASIC3.09□□□□□ -1.92
SHMT2P34897 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC3.09□□□□□ -1.92
SHMT2P34897 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.92
SHMT2P34897 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SHMT2P34897 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
SHMT2P34897 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
SHMT2P34897 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
SHMT2P34897 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
SHMT2P34897 SPZ1-201ENST00000296739 1868 ntAPPRIS P2 BASIC3.08□□□□□ -1.92
SHMT2P34897 RNU6-251P-201ENST00000363235 104 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 RNU6-263P-201ENST00000363811 107 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 RNU6-335P-201ENST00000364563 113 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 Y_RNA.493-201ENST00000384422 102 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 MIR607-201ENST00000385241 96 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 TMSB4XP8-201ENST00000402089 135 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 SNORA11.1-201ENST00000408133 129 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 RNA5SP56-201ENST00000410277 118 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 AL136133.1-201ENST00000413694 376 ntBASIC3.08□□□□□ -1.92
SHMT2P34897 TMSB4XP6-201ENST00000415187 135 ntBASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms