Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN6P29350 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.32□□□□□ -1.88
PTPN6P29350 AP000619.3-201ENST00000535634 1127 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPN6P29350 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN6P29350 AL391156.1-201ENST00000554965 554 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN6P29350 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN6P29350 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.32□□□□□ -1.88
PTPN6P29350 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.32□□□□□ -1.88
PTPN6P29350 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
PTPN6P29350 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPN6P29350 AC020914.6-201ENST00000594327 272 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AL355810.1-201ENST00000614629 552 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AC069209.1-201ENST00000619282 651 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AC244100.1-202ENST00000621554 382 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AC009269.6-201ENST00000621778 588 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.32□□□□□ -1.88
PTPN6P29350 AC107982.1-201ENST00000507171 1300 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC3.32□□□□□ -1.88
PTPN6P29350 AC007823.1-201ENST00000569932 1566 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 AC110774.1-201ENST00000623567 2018 ntBASIC3.32□□□□□ -1.88
PTPN6P29350 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN6P29350 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN6P29350 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
PTPN6P29350 NR3C1-212ENST00000504572 3389 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN6P29350 MFSD8-233ENST00000641482 4860 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN6P29350 RIOK3P1-201ENST00000418778 1528 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 SNORD9-201ENST00000362566 104 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 RNU5E-10P-201ENST00000363506 118 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 SNORD46.1-201ENST00000364139 104 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 MIR506-201ENST00000384998 124 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN6P29350 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN6P29350 RNU6-712P-201ENST00000410558 100 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 MRPS36P1-201ENST00000421291 307 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 AC012065.2-201ENST00000421295 375 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN6P29350 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN6P29350 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN6P29350 SNORD105B-201ENST00000458770 79 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 snoU109.4-201ENST00000458953 143 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 AC108734.3-201ENST00000481241 1165 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN6P29350 PRELID3BP6-201ENST00000503839 571 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN6P29350 AC113347.3-201ENST00000509113 148 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 AC026412.2-201ENST00000512270 1075 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 RNU6-27P-201ENST00000516146 107 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
PTPN6P29350 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN6P29350 AC126177.3-201ENST00000551839 688 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.31□□□□□ -1.88
PTPN6P29350 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC3.31□□□□□ -1.88
PTPN6P29350 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN6P29350 AC069431.2-201ENST00000604149 1099 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 AC055876.5-201ENST00000605667 259 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 AC011816.2-201ENST00000607089 556 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 AL121652.1-201ENST00000608851 448 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN6P29350 KLRC2-206ENST00000619500 883 ntTSL 5 BASIC3.31□□□□□ -1.88
PTPN6P29350 AP003355.3-201ENST00000623465 114 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC3.31□□□□□ -1.88
PTPN6P29350 AC009093.8-201ENST00000641769 292 ntBASIC3.31□□□□□ -1.88
PTPN6P29350 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN6P29350 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
PTPN6P29350 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN6P29350 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN6P29350 SGO1P2-201ENST00000429458 1589 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AL049780.3-201ENST00000624612 1583 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN6P29350 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN6P29350 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN6P29350 SNORA63.1-201ENST00000362493 131 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 RNU5D-1-201ENST00000363299 116 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN6P29350 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN6P29350 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
PTPN6P29350 SNRPEP2-201ENST00000397592 279 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 OR1AA1P-201ENST00000419597 916 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN6P29350 AL354692.1-201ENST00000423044 315 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN6P29350 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPN6P29350 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PTPN6P29350 HSPD1P21-201ENST00000436541 245 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 HIGD1AP11-201ENST00000438361 280 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 MTCO1P53-201ENST00000441633 699 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AL358794.1-201ENST00000445689 381 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 MTND2P19-201ENST00000449129 1012 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.3□□□□□ -1.88
PTPN6P29350 AC087312.1-201ENST00000471411 480 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AC023598.1-201ENST00000472521 361 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 HMGN2P13-201ENST00000476476 274 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC3.3□□□□□ -1.88
PTPN6P29350 MLLT10P2-201ENST00000506434 249 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 AC006390.1-201ENST00000508068 283 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 MTCYBP16-201ENST00000509187 1129 ntBASIC3.3□□□□□ -1.88
PTPN6P29350 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 117 ms